Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq108450 132 1e-26 seq263247 111 4e-20 seq233512 96.9 9e-16 seq256480 89.7 1e-13 seq243462 84.2 6e-12 >seq108450 Length=476 Score = 132 bits (146), Expect = 1e-26 Identities = 182/254 (72%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 37802 CATATCCGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGC 37861 || || || | ||||| | |||||||| ||||| | | ||||| || ||||| ||| Sbjct 191 CAGATGCGGTNNATCATCCACGAACTGCTGTGGTTCCTGACCGGCGACACCAACGTGCGC 250 Query 37862 TATTTGCAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTC 37921 | |||| || || |||||||| ||||| |||||||| |||| || ||||||||| Sbjct 251 GCCCTCCAGGCCAACGGGGTGACGATCTGGGACGAGTGGGCCGACGCCAATGGCGATCTC 310 Query 37922 GGCCCGATTTACGGCGCGCAATGGCGCTCGTGG---AAGGGAGCAGACGGGAAAACCATC 37978 || || | |||||| ||||||||||| ||| ||| | || || | | || Sbjct 311 GGACCCGTCTACGGCCGCCAATGGCGCTCCTGGGCCAAG---CCCGATGGCGGCAGCGTC 367 Query 37979 GACCAGATCGCATGGGTTGTCGAAGAGATCAAACGAAATCCGCATTCACGCCGGCTGCTG 38038 ||||||||||| ||||| ||||| |||||| || || ||| |||| ||||| || || Sbjct 368 GACCAGATCGCCTGGGTCGTCGACGAGATCCGCCGCAACCCGGATTCGCGCCGCCTCGTG 427 Query 38039 GTGAGCGCTTGGAA 38052 || ||| ||||| Sbjct 428 GTCTCCGCCTGGAA 441 >seq263247 Length=570 Score = 111 bits (122), Expect = 4e-20 Identities = 280/423 (66%), Gaps = 2/423 (0%) Strand=Plus/Minus Query 37913 GGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAA 37972 |||||||||| |||| | | |||| ||| ||||| ||| || ||||| Sbjct 560 GGCGATCTCGCCCCGGTCTGCGGCAGGCAGTGGCGTGACTGGGCCCCCGCCGACGGCCGC 501 Query 37973 ACCATCGACCAGATCGCATGGGTTGTCGAAGAGATCAA-ACGAAATCCGCATTCACGCCG 38031 ||||||||||||||| | | ||| ||||||| || || |||| | | ||||| Sbjct 500 CACATCGACCAGATCGCCGAGCTGATCGGCCAGATCAAGACCAACCCCGCCT-CGCGCCG 442 Query 38032 GCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCA 38091 | | | || ||||| |||||| | || || ||| |||| ||| | || || || Sbjct 441 CCAGATCGTTAGCGCATGGAATCCCGGCGACCTGCACGCGATGGCGCTCGCACCCTGCCA 382 Query 38092 TTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTC 38151 || | || ||| | ||||| |||||| | |||| | | | |||||||| Sbjct 381 TTGCCTGTTCCAGACGCACGTCGCGAACGGCAAGCTGTCGCTCCAGCTCTACCAGCGCTC 322 Query 38152 CGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATAT 38211 | || | || | || ||||||| |||||||| |||||||||||| | || || || Sbjct 321 GGGCGACATCTTCCTCGGCGTGCCGTTCAACATCGCCAGCTACGCGCTGCTCACCCACAT 262 Query 38212 GGTAGCCCAACAATGCGACTTGGATGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCA 38271 | || || ||||||| |||| ||||| || |||| | |||||||||||| ||| Sbjct 261 CCTCGCGCAGCAATGCGGGCTGGAGGTCGGCGAGTTCATCTGGACCGGCGGCGACTGCCA 202 Query 38272 TTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCT 38331 | || || ||||| || || ||| |||| ||||| ||| ||| | ||||| Sbjct 201 CCTCTATTCGAACCATCTCGACCAGGCGCGTTTGCAACTGACACGCTCGCCCGGGCCGCT 142 Query 38332 GCC 38334 || Sbjct 141 CCC 139 >seq233512 Length=455 Score = 96.9 bits (106), Expect = 9e-16 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 37866 TGCAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCC 37925 |||||||| | |||||| ||| ||| | |||||||||||||| |||||| ||||||| Sbjct 159 TGCAGGAGCACGGCGTGCGGATCTGGAACGAGTGGGCGGACGAGTCCGGCGACCTCGGCC 100 Query 37926 CGATTTACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGA 37985 || | ||||||| ||| ||||| |||||| | | |||| | ||||||||||| Sbjct 99 CGGTCTACGGCGTGCAGTGGCGGTCGTGGCCGACGCCGTCCGGGGAGCACATCGACCAGA 40 Query 37986 TCGCATGGGTTGTCGAAGAGATC 38008 |||| ||| |||| ||||| Sbjct 39 TCGCCCAGGTCATCGAGCAGATC 17 >seq256480 Length=539 Score = 89.7 bits (98), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 6/144 (4%) Strand=Plus/Minus Query 37808 CGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTG 37867 ||||| ||||| |||||||| ||||| | ||||| || || ||||||| || Sbjct 183 CGCTCGATCATCGTCGAACTGCTGTGGTTCCTGCGCGGCGACACCAATGTCCGCTGGCTG 124 Query 37868 CAGGAG---AATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGC 37924 |||||| || | || |||| ||||| || ||||||||||| |||||||||||| Sbjct 123 CAGGAGCGCAAGGTCG---CGATCTGGGACGAATGGGCGGACGAGGCGGGCGATCTCGGC 67 Query 37925 CCGATTTACGGCGCGCAATGGCGC 37948 ||| | |||||| |||||||||| Sbjct 66 CCGGTCTACGGCAAGCAATGGCGC 43 >seq243462 Length=264 Score = 84.2 bits (92), Expect = 6e-12 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 37736 GTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGATGGATTTCCGCTCGTGACAACGAAA 37795 |||||||| | |||| | || ||| || | || || || ||||| || || ||||| Sbjct 171 GTGTTCGGGCACCAGATGCGGTTCGACCTGTCGGAGGGGTTCCCGCTGGTCACCACGAAG 112 Query 37796 AAATTGCATATCCGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAAC 37855 || |||| | || || | || || ||||| ||||| | ||||| || ||| Sbjct 111 AAGGTGCACCTGCGGTCGGTGATCGTCGAGCTGCTGTGGTTCCTGCGCGGCGAGACCAAC 52 Query 37856 GTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGAC 37906 ||||||| |||||||| ||||||||||| ||||| || ||||||||| Sbjct 51 GTCCGCTGGCTGCAGGAGCGCGGCGTGACGATCTGGGACGAATGGGCGGAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130210147287950