Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq170880 210 2e-49 seq13366 129 5e-25 seq7533 111 1e-19 seq266287 84.2 2e-11 >seq170880 Length=1133 Score = 210 bits (232), Expect = 2e-49 Identities = 381/553 (69%), Gaps = 6/553 (1%) Strand=Plus/Minus Query 66391 CTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGG 66450 ||| || |||| ||||| ||||| | ||||| | |||||||||||| ||||| || Sbjct 1128 CTCTTCCTTGCCATGATTCTTGCGGAGATCGAGCCAGGCAAAGATGTCGGGGTGCCACGG 1069 Query 66451 TTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 || |||||||||||||||| ||| || ||| ||||| |||||||| ||||| || Sbjct 1068 CTCAAGGTAGATGGCGAACGCACCCGGGCGCTTGTTCCCACCCTGGTCGACATAGCGGGC 1009 Query 66511 GACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTC 66570 ||||||||||| || | ||| || |||| ||||| || | || || ||||| | Sbjct 1008 AGTGTTGTTGAAGACGCGGAGCATGGGCACGATGCCGTTCGAGTATCCGTTTGTGCCACC 949 Query 66571 GATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630 |||| | ||| || || || | ||||| | || || ||||| ||||| ||||| Sbjct 948 GATGTAGCTTCCGGAGGCACGGATGTTGTGAATGTGGAGGCCGATACCGCCGGCGGTCTT 889 Query 66631 CGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTG 66688 ||||| || || || | || || | | ||||| || || ||||| |||| Sbjct 888 GGAGATCATGGCGCA--CGTCTTCAGGGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTC 831 Query 66689 ATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTG 66748 || | || |||| |||| || ||| ||||| | ||| ||| | || |||||||||| Sbjct 830 ATCGCCACGAGGAAGCAAGACGCAAGCTGGGGGTGGGGCGTGCCAGCATTGAAGAGGGTG 771 Query 66749 GGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACA-GCATC 66807 || | || || || ||||| | |||||||| |||||||||||||| || || | Sbjct 770 GGCGAGGCATGGGTGAAGTACTTTTCGGACATGTAGTTGTACGTCTCGATCGCACGCGT- 712 Query 66808 AATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867 | ||| | ||| || || |||| || ||||| || | || || || || ||| | Sbjct 711 GACGTTGTTGCCGTGGATGCCGATAGCGACGCGCATGAGCATGTGCTGCGGGCGCTCGGC 652 Query 66868 CAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGA 66927 | || | | ||| | | | |||||| || || |||||||||| |||||||| Sbjct 651 GACGCGGCCGTCGATGCGGAGAAGGTAGGACCGCTCAAGGGTCTTGAAGCCAAAGTAATT 592 Query 66928 GTAATTGAAATCG 66940 |||||| || ||| Sbjct 591 GTAATTAAAGTCG 579 >seq13366 Length=6323 Score = 129 bits (142), Expect = 5e-25 Identities = 883/1415 (62%), Gaps = 48/1415 (3%) Strand=Plus/Plus Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521 || || || || || | ||||||||| |||||||||||||| |||||||| |||||||| Sbjct 892 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 951 Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGA 65581 ||||| ||||| ||||| | ||| | || || ||||| || | || | || || | Sbjct 952 GCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCT 1011 Query 65582 CGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGT 65641 | | |||||| ||| | ||| | | | || | | ||||||||| | Sbjct 1012 TTAAGGACAGCCCAGTCCCAAA--GGTCTGTAG--GAGTT--TTGTCCCACATATCATAC 1065 Query 65642 TGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTG 65701 || ||| | || || || || || | | | ||| | || || | | Sbjct 1066 TGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCA 1125 Query 65702 GCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTA 65761 || | || ||| || | || | ||| || ||||||| || || || || || |||| Sbjct 1126 GCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTG 1185 Query 65762 AGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGA 65821 || ||| | || || ||||| | || | ||||| ||||| | || |||| Sbjct 1186 AGAAGTATTGCTTTCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATG 1245 Query 65822 CCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACA 65881 || ||||| |||||||| || || | ||| | || ||| ||| | | |||||||| ||| Sbjct 1246 CCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCCTCAGGGACA 1305 Query 65882 GGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGT 65941 || || |||| | ||| |||| || ||||| | || || | | ||| | Sbjct 1306 GGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCT 1365 Query 65942 CGCAATTGTTCGAAATCAAA-ATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTT 66000 |||| || |||| ||| |||| || | |||||| | Sbjct 1366 TTTAATTTTTTAAAATTAAATCTGTT-------AT------------TTTCAACAAACAT 1406 Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060 | ||| || | || || |||||||| || || | || || | || || | || Sbjct 1407 GTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCAC 1466 Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCG 66120 || || ||||| ||||| || || || ||||| | ||| | |||||||||||| | Sbjct 1467 AACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCT 1526 Query 66121 ATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180 || || |||||||| |||| |||||| || || || ||||| ||||||| || || || Sbjct 1527 GTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAAT 1586 Query 66181 GGCGTGCCAAA------GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTC 66234 | | ||| | |||| | || ||| || | || ||| ||| Sbjct 1587 TGACTTCCATAACTCTTGAGCTC-TGACTT-GTTTTATAAATCG-------TTTTTCTTC 1637 Query 66235 GTAATGTT---CGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291 | || || | || || | ||| || || || | || | || | ||||| Sbjct 1638 TTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACA 1697 Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351 | || |||||||| || |||| | |||||| |||||| | |||||| ||||| Sbjct 1698 ATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTCATAAACAGATC 1757 Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTT 66410 |||||||| | || || || || || | |||| || || | || ||| || | Sbjct 1758 TGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-TTCT 1816 Query 66411 TGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACG 66470 | || || | ||| ||||| || || |||||||| || || | || || || || | Sbjct 1817 TCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGGCTCTAAATAAATTGCAAATG 1876 Query 66471 AGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCA 66530 ||| ||||||| |||||||| || || || | || |||||| | || | || Sbjct 1877 CGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCA 1936 Query 66531 ACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCC 66590 |||| || || || || || || ||||| ||||| | ||| || || | || | Sbjct 1937 ACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGAACCCTGAGCTC 1996 Query 66591 GTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGG 66650 || || || | ||| || ||||| || | || || || ||||| | Sbjct 1997 TGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTT 2056 Query 66651 CCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAAC 66710 | || || || || |||||| || | || || | | ||| | || || Sbjct 2057 TTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAACAGGAGG 2116 Query 66711 TAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAAT 66770 ||| || || |||||||| || ||||| || || || | || || ||||| || | Sbjct 2117 AAAGCTGTGGCCGCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATT 2176 Query 66771 GGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA 66830 ||||| ||| || || | ||| || |||||||| ||| |||||||| || | Sbjct 2177 TCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATGCCTA 2236 Query 66831 GTGCACA-TCGCATCAGGAGGTATTGAGGCCGTTC 66864 || | | || ||| || | || |||||||| ||| Sbjct 2237 -TGGAGACTCTCATAAGCATGTGTTGAGGCCTTTC 2270 >seq7533 Length=2710 Score = 111 bits (122), Expect = 1e-19 Identities = 170/241 (71%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || |||||||| || || || |||| || ||| ||| || || ||||| || | Sbjct 1637 TTATTCAATGCAATTGAAACTCTACCATGTGTTAAGAAGAAGGCAGACTGGGCGTTACAG 1696 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 |||||| ||| | || ||||||||||| ||||| | | || ||||| | || ||| Sbjct 1697 TGGATCGGCAGCAAGACAGCTACATTTGGAGAACGTATAATTGCTTTTGCAGCAGTTGAG 1756 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || |||||||| || ||||| |||| ||||||||||| ||||| || || ||| Sbjct 1757 GGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGAGGTCTGATG 1816 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTT 61635 ||||| |||| ||||| ||||| | || || | || || || ||| | || ||||| Sbjct 1817 CCCGGATTGACTTTCAGTAATGAACTTATTTCTAGGGATGA-GGTATGTTTCGTAATTTT 1875 Query 61636 G 61636 | Sbjct 1876 G 1876 >seq266287 Length=596 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 |||||||||||||||||||| || || || || |||| ||||||||||| |||||| Sbjct 30 TCGACCGTGAACTGGATCGCGTTCGCGGCAGCGCGCGTCCGGAGATAGTACATACCGGTC 89 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCG 65171 ||||| || |||||||||||| ||||||| Sbjct 90 TTGAGTCCCTTTTTCCAAGCATAGAAGTGCATCG 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396225433115120