Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq170880 210 2e-49
seq13366 129 5e-25
seq7533 111 1e-19
seq266287 84.2 2e-11
>seq170880
Length=1133
Score = 210 bits (232), Expect = 2e-49
Identities = 381/553 (69%), Gaps = 6/553 (1%)
Strand=Plus/Minus
Query 66391 CTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGG 66450
||| || |||| ||||| ||||| | ||||| | |||||||||||| ||||| ||
Sbjct 1128 CTCTTCCTTGCCATGATTCTTGCGGAGATCGAGCCAGGCAAAGATGTCGGGGTGCCACGG 1069
Query 66451 TTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510
|| |||||||||||||||| ||| || ||| ||||| |||||||| ||||| ||
Sbjct 1068 CTCAAGGTAGATGGCGAACGCACCCGGGCGCTTGTTCCCACCCTGGTCGACATAGCGGGC 1009
Query 66511 GACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTC 66570
||||||||||| || | ||| || |||| ||||| || | || || ||||| |
Sbjct 1008 AGTGTTGTTGAAGACGCGGAGCATGGGCACGATGCCGTTCGAGTATCCGTTTGTGCCACC 949
Query 66571 GATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630
|||| | ||| || || || | ||||| | || || ||||| ||||| |||||
Sbjct 948 GATGTAGCTTCCGGAGGCACGGATGTTGTGAATGTGGAGGCCGATACCGCCGGCGGTCTT 889
Query 66631 CGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTG 66688
||||| || || || | || || | | ||||| || || ||||| ||||
Sbjct 888 GGAGATCATGGCGCA--CGTCTTCAGGGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTC 831
Query 66689 ATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTG 66748
|| | || |||| |||| || ||| ||||| | ||| ||| | || ||||||||||
Sbjct 830 ATCGCCACGAGGAAGCAAGACGCAAGCTGGGGGTGGGGCGTGCCAGCATTGAAGAGGGTG 771
Query 66749 GGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACA-GCATC 66807
|| | || || || ||||| | |||||||| |||||||||||||| || || |
Sbjct 770 GGCGAGGCATGGGTGAAGTACTTTTCGGACATGTAGTTGTACGTCTCGATCGCACGCGT- 712
Query 66808 AATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867
| ||| | ||| || || |||| || ||||| || | || || || || ||| |
Sbjct 711 GACGTTGTTGCCGTGGATGCCGATAGCGACGCGCATGAGCATGTGCTGCGGGCGCTCGGC 652
Query 66868 CAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGA 66927
| || | | ||| | | | |||||| || || |||||||||| ||||||||
Sbjct 651 GACGCGGCCGTCGATGCGGAGAAGGTAGGACCGCTCAAGGGTCTTGAAGCCAAAGTAATT 592
Query 66928 GTAATTGAAATCG 66940
|||||| || |||
Sbjct 591 GTAATTAAAGTCG 579
>seq13366
Length=6323
Score = 129 bits (142), Expect = 5e-25
Identities = 883/1415 (62%), Gaps = 48/1415 (3%)
Strand=Plus/Plus
Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521
|| || || || || | ||||||||| |||||||||||||| |||||||| ||||||||
Sbjct 892 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 951
Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGA 65581
||||| ||||| ||||| | ||| | || || ||||| || | || | || || |
Sbjct 952 GCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCT 1011
Query 65582 CGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGT 65641
| | |||||| ||| | ||| | | | || | | ||||||||| |
Sbjct 1012 TTAAGGACAGCCCAGTCCCAAA--GGTCTGTAG--GAGTT--TTGTCCCACATATCATAC 1065
Query 65642 TGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTG 65701
|| ||| | || || || || || | | | ||| | || || | |
Sbjct 1066 TGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCA 1125
Query 65702 GCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTA 65761
|| | || ||| || | || | ||| || ||||||| || || || || || ||||
Sbjct 1126 GCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTG 1185
Query 65762 AGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGA 65821
|| ||| | || || ||||| | || | ||||| ||||| | || ||||
Sbjct 1186 AGAAGTATTGCTTTCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATG 1245
Query 65822 CCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACA 65881
|| ||||| |||||||| || || | ||| | || ||| ||| | | |||||||| |||
Sbjct 1246 CCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCCTCAGGGACA 1305
Query 65882 GGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGT 65941
|| || |||| | ||| |||| || ||||| | || || | | ||| |
Sbjct 1306 GGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCT 1365
Query 65942 CGCAATTGTTCGAAATCAAA-ATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTT 66000
|||| || |||| ||| |||| || | |||||| |
Sbjct 1366 TTTAATTTTTTAAAATTAAATCTGTT-------AT------------TTTCAACAAACAT 1406
Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060
| ||| || | || || |||||||| || || | || || | || || | ||
Sbjct 1407 GTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCAC 1466
Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCG 66120
|| || ||||| ||||| || || || ||||| | ||| | |||||||||||| |
Sbjct 1467 AACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCT 1526
Query 66121 ATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180
|| || |||||||| |||| |||||| || || || ||||| ||||||| || || ||
Sbjct 1527 GTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAAT 1586
Query 66181 GGCGTGCCAAA------GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTC 66234
| | ||| | |||| | || ||| || | || ||| |||
Sbjct 1587 TGACTTCCATAACTCTTGAGCTC-TGACTT-GTTTTATAAATCG-------TTTTTCTTC 1637
Query 66235 GTAATGTT---CGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291
| || || | || || | ||| || || || | || | || | |||||
Sbjct 1638 TTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACA 1697
Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351
| || |||||||| || |||| | |||||| |||||| | |||||| |||||
Sbjct 1698 ATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTCATAAACAGATC 1757
Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTT 66410
|||||||| | || || || || || | |||| || || | || ||| || |
Sbjct 1758 TGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-TTCT 1816
Query 66411 TGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACG 66470
| || || | ||| ||||| || || |||||||| || || | || || || || |
Sbjct 1817 TCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGGCTCTAAATAAATTGCAAATG 1876
Query 66471 AGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCA 66530
||| ||||||| |||||||| || || || | || |||||| | || | ||
Sbjct 1877 CGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCA 1936
Query 66531 ACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCC 66590
|||| || || || || || || ||||| ||||| | ||| || || | || |
Sbjct 1937 ACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGAACCCTGAGCTC 1996
Query 66591 GTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGG 66650
|| || || | ||| || ||||| || | || || || ||||| |
Sbjct 1997 TGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTT 2056
Query 66651 CCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAAC 66710
| || || || || |||||| || | || || | | ||| | || ||
Sbjct 2057 TTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAACAGGAGG 2116
Query 66711 TAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAAT 66770
||| || || |||||||| || ||||| || || || | || || ||||| || |
Sbjct 2117 AAAGCTGTGGCCGCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATT 2176
Query 66771 GGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA 66830
||||| ||| || || | ||| || |||||||| ||| |||||||| || |
Sbjct 2177 TCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATGCCTA 2236
Query 66831 GTGCACA-TCGCATCAGGAGGTATTGAGGCCGTTC 66864
|| | | || ||| || | || |||||||| |||
Sbjct 2237 -TGGAGACTCTCATAAGCATGTGTTGAGGCCTTTC 2270
>seq7533
Length=2710
Score = 111 bits (122), Expect = 1e-19
Identities = 170/241 (71%), Gaps = 1/241 (0%)
Strand=Plus/Plus
Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455
|| |||||||| || || || |||| || ||| ||| || || ||||| || |
Sbjct 1637 TTATTCAATGCAATTGAAACTCTACCATGTGTTAAGAAGAAGGCAGACTGGGCGTTACAG 1696
Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515
|||||| ||| | || ||||||||||| ||||| | | || ||||| | || |||
Sbjct 1697 TGGATCGGCAGCAAGACAGCTACATTTGGAGAACGTATAATTGCTTTTGCAGCAGTTGAG 1756
Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575
|| |||||||| || ||||| |||| ||||||||||| ||||| || || |||
Sbjct 1757 GGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGAGGTCTGATG 1816
Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTT 61635
||||| |||| ||||| ||||| | || || | || || || ||| | || |||||
Sbjct 1817 CCCGGATTGACTTTCAGTAATGAACTTATTTCTAGGGATGA-GGTATGTTTCGTAATTTT 1875
Query 61636 G 61636
|
Sbjct 1876 G 1876
>seq266287
Length=596
Score = 84.2 bits (92), Expect = 2e-11
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|||||||||||||||||||| || || || || |||| ||||||||||| ||||||
Sbjct 30 TCGACCGTGAACTGGATCGCGTTCGCGGCAGCGCGCGTCCGGAGATAGTACATACCGGTC 89
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCG 65171
||||| || |||||||||||| |||||||
Sbjct 90 TTGAGTCCCTTTTTCCAAGCATAGAAGTGCATCG 123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396225433115120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |