Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_016654.1
Length=39474
Score E
Sequences producing significant alignments: (Bits) Value
seq248049 268 2e-67
seq153771 262 1e-65
seq136878 241 3e-59
seq226360 140 8e-29
>seq248049
Length=1043
Score = 268 bits (296), Expect = 2e-67
Identities = 272/351 (77%), Gaps = 4/351 (1%)
Strand=Plus/Plus
Query 12175 GACACCCTGATCACCATCATCGGCAACCTGGTGGCGGACCCCGAGTTGCGGTTCACGCCG 12234
|||||| | ||||| | ||||||||||| ||| || |||||| |||| ||||| |
Sbjct 562 GACACCATCATCACGGTGGTCGGCAACCTGACGGCCGATCCCGAGCTGCGCTTCACCGCC 621
Query 12235 GCCGGTGCTGCCGTCGCCAACTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCAG 12294
|||| || ||||| || |||||||||||||| || || || || ||| ||||| |||
Sbjct 622 TCCGGCGCGGCCGTTGCGAACTTCACCGTCGCATCGACCCCCCGGACGCTCGACC-GCAC 680
Query 12295 --GCGAACGAGTGGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGG 12352
||| ||||||||||||||| ||||| || ||| |||||||| | | ||||| |||
Sbjct 681 CAGCGG-CGAGTGGAAGGACGGCGAGGCCCTCTTCCTGCGCTGCAACATCTGGCGGCAGG 739
Query 12353 CCGCCGAGAACGTCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGC 12412
| |||||||||||| | ||| | | || ||||| || ||||||||||||||| ||
Sbjct 740 CTGCCGAGAACGTCACGGAGTCGCTCACCCGCGGCTCCCGCGTCATCGTCACCGGCCGGC 799
Query 12413 TCAAGTCCCGCACCTTCGAGACGCGTGAGGGGGAGAAGCGGACCGTCATCGAACTGGAGG 12472
||||| |||| ||||||||| || || |||||||| ||||||||||| |||||||
Sbjct 800 TCAAGCAGCGCAGCTTCGAGACCAAGGAAGGCGAGAAGCGCACCGTCATCGAGCTGGAGG 859
Query 12473 TCGACGAGATCGGCCCCAGCCTCCGCTACGCCACCGCCACCGTGAACAAGG 12523
||||||||||||||||| || || ||||| ||||||| || |||||||
Sbjct 860 TCGACGAGATCGGCCCCTCGCTGCGGTACGCGACCGCCAAGGTCAACAAGG 910
>seq153771
Length=831
Score = 262 bits (290), Expect = 1e-65
Identities = 273/358 (76%), Gaps = 0/358 (0%)
Strand=Plus/Minus
Query 12185 TCACCATCATCGGCAACCTGGTGGCGGACCCCGAGTTGCGGTTCACGCCGGCCGGTGCTG 12244
|||||||| |||||||||| || | ||||||||| ||||||||||||| | || || |
Sbjct 427 TCACCATCGTCGGCAACCTCGTCGACGACCCCGAGCTGCGGTTCACGCCCTCGGGCGCCG 368
Query 12245 CCGTCGCCAACTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCAGGCGAACGAGT 12304
| |||||||||||| | |||| ||||| |||||||||||| || ||| | ||||| |
Sbjct 367 CAGTCGCCAACTTCCGCATCGCCTCCACCCCGCGCACGTTCAACCGTCAGACCAACGACT 308
Query 12305 GGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGGCCGCCGAGAACG 12364
|| ||||||| |||| ||||| | |||| |||||||||| |||| ||||||||||
Sbjct 307 GGGAGGACGGTGAGGGCATGTTCCTCACCTGCTCGGTGTGGCGTCAGGCGGCCGAGAACG 248
Query 12365 TCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGCTCAAGTCCCGCA 12424
|||| ||| |||| ||| ||| ||| ||| ||||| || ||||||||| ||||
Sbjct 247 TCGCGGAGTCCTTGCAGCGCGGCATGCGCGTCGTCGTCCAGGGACGGCTCAAGTCGCGCA 188
Query 12425 CCTTCGAGACGCGTGAGGGGGAGAAGCGGACCGTCATCGAACTGGAGGTCGACGAGATCG 12484
||| |||||| || ||||| |||||||| |||||| |||| | |||||||| ||| |||
Sbjct 187 CCTACGAGACCCGCGAGGGCGAGAAGCGCACCGTCTTCGAGATCGAGGTCGAGGAGGTCG 128
Query 12485 GCCCCAGCCTCCGCTACGCCACCGCCACCGTGAACAAGGCCAACCGCGGCGGGGGAGG 12542
| || ||||| | |||||| |||| || ||| ||| ||| |||| || ||
Sbjct 127 GGCCGAGCCTGAAGTTCGCCACGGCCAAGGTCAACCGCGCCTCGCGCAGCGGCGGCGG 70
>seq136878
Length=1830
Score = 241 bits (266), Expect = 3e-59
Identities = 268/358 (75%), Gaps = 0/358 (0%)
Strand=Plus/Minus
Query 12185 TCACCATCATCGGCAACCTGGTGGCGGACCCCGAGTTGCGGTTCACGCCGGCCGGTGCTG 12244
||||| ||||||| |||||| ||||| ||||| |||| ||||| ||| ||||||| |
Sbjct 386 TCACCGTCATCGGGAACCTGACCGCGGATCCCGAACTGCGTTTCACCCCGTCCGGTGCGG 327
Query 12245 CCGTCGCCAACTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCAGGCGAACGAGT 12304
| || |||||||||||||| |||||||||||||| | ||||||| ||| | ||||| |
Sbjct 326 CGGTGGCCAACTTCACCGTTGCGTCCACGCCGCGGATGTTCGACCGTCAGACCAACGAAT 267
Query 12305 GGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGGCCGCCGAGAACG 12364
|||| ||||| ||||| ||||||||||| ||| | ||||| ||||| ||||||||||
Sbjct 266 GGAAAGACGGCGAGGCACTGTTCATGCGGTGCAGCATCTGGCGGGAGGCGGCCGAGAACG 207
Query 12365 TCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGCTCAAGTCCCGCA 12424
| || |||||| | | ||| | || |||||||| | || ||||||| |||
Sbjct 206 TGGCGGAGAGCCTCACCAAGGGTGCTCGTGTCATCGTGTCGGGTCGGCTCAAGCAGCGCT 147
Query 12425 CCTTCGAGACGCGTGAGGGGGAGAAGCGGACCGTCATCGAACTGGAGGTCGACGAGATCG 12484
||| ||| || || ||||| |||||||| || || |||| || |||||||| ||| |||
Sbjct 146 CCTACGAAACCCGCGAGGGTGAGAAGCGCACGGTGGTCGAGCTCGAGGTCGAGGAGGTCG 87
Query 12485 GCCCCAGCCTCCGCTACGCCACCGCCACCGTGAACAAGGCCAACCGCGGCGGGGGAGG 12542
| ||| || ||||| ||||||| || ||| ||| || ||||| || ||
Sbjct 86 GTCCCTCGCTGAAGTACGCGACCGCCAAGGTCAACCGCGCCTCGCGTGGCGGTGGCGG 29
>seq226360
Length=376
Score = 140 bits (154), Expect = 8e-29
Identities = 236/339 (70%), Gaps = 24/339 (7%)
Strand=Plus/Plus
Query 12175 GACACCCTGATCACCATCATCGGCAACCTGGTGGCGGACCCCGAGTTGCGGTTCACGCCG 12234
||||| | ||||| | ||||||||||| ||| ||||| ||| |||| | ||||| |
Sbjct 15 GACACGATCATCACGGTGGTCGGCAACCTGACGGCCGACCCGGAGCTGCGCTACACGCAG 74
Query 12235 GCCGGTGCT-GCCGTCGCCAACTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCA 12293
||| ||| ||||| || ||||||||| |||| ||| || ||||
Sbjct 75 AGCGG-GCTCGCCGTGGCGAACTTCACCATCGCCAGCACCCCCCGCANN----------- 122
Query 12294 GGCGAACGAGTGGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTG-TGGCGTGAGG 12352
|||||||||||||| ||||| |||||| | || ||| || |||||||||
Sbjct 123 -------GAGTGGAAGGACGGCGAGGCCCTGTTCCTCCGG-GCCTCCTGCTGGCGTGAGT 174
Query 12353 CCGCCGAGAACGTCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGC 12412
||||||| ||||||||| | || | |||| || ||||||| ||| |
Sbjct 175 TCGCCGAGCACGTCGCCGGGTCGCTGACCAAGGGCAGCCGCGTCATCGCGCAGGGCCGCC 234
Query 12413 TCAAGTCCCGCACCTTCGA-GACGCGTGAGGGGGAGAAGCGGACCGTCATCGAACTGGAG 12471
| ||| ||| ||| ||| ||| || || || | ||||| |||| ||||| || |||
Sbjct 235 TGAAGCAGCGCTCCTACGACGAC-CGCGATGGCAACAAGCGCACCGCGATCGAGCTCGAG 293
Query 12472 GTCGACGAGATCGGCCCCAGCCTCCGCTACGCCACCGCC 12510
||||||||||||||||| |||||||| || || ||||||
Sbjct 294 GTCGACGAGATCGGCCCGAGCCTCCGTTATGCGACCGCC 332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125779972282856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |