Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031076.1
Length=38071
Score E
Sequences producing significant alignments: (Bits) Value
seq153771 246 7e-61
seq136878 187 6e-43
seq248049 149 2e-31
seq226360 145 2e-30
seq46609 89.7 1e-13
>seq153771
Length=831
Score = 246 bits (272), Expect = 7e-61
Identities = 269/354 (76%), Gaps = 4/354 (1%)
Strand=Plus/Minus
Query 34859 GAAACCCCTA--TCACCATCGTGGGCAACCTCACCGCCGACCCCGAACTGCGATATACCA 34916
|| || |||| |||||||||| ||||||||| || ||||||||| ||||| | ||
Sbjct 439 GAGACACCTACGTCACCATCGTCGGCAACCTCGTCGACGACCCCGAGCTGCGGTTCACGC 380
Query 34917 ATTCGGGCATTGCCGTCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCGGC 34976
|||||| || |||||||||||| | |||| ||||| || ||||| ||| |||| |
Sbjct 379 CCTCGGGCGCCGCAGTCGCCAACTTCCGCATCGCCTCCACCCCGCGCACGTTCAACCGTC 320
Query 34977 AAGCCAACGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGTCAGC 35036
| ||||||| ||| ||||||| |||| | ||||||| ||||||||||||||||||||
Sbjct 319 AGACCAACGACTGGGAGGACGGTGAGGGCATGTTCCTCACCTGCTCGGTGTGGCGTCAGG 260
Query 35037 CGGCCGAGAACGTGGCCGAATCGCTGGCCAAG-GGCATGCGTGTGATCGTCCAGGGACGT 35095
||||||||||||| || || || || || | |||||||| || |||||||||||||
Sbjct 259 CGGCCGAGAACGTCGCGGAGTC-CTTGCAGCGCGGCATGCGCGTCGTCGTCCAGGGACGG 201
Query 35096 CTCCGGGCGCGCAGCTACGACGACCGCGACGGAAACCGTCGCACTGTGATCGGGATCGAA 35155
||| | |||||| |||||| |||||| || | ||||| || ||| ||||||
Sbjct 200 CTCAAGTCGCGCACCTACGAGACCCGCGAGGGCGAGAAGCGCACCGTCTTCGAGATCGAG 141
Query 35156 GTCGATGACGTGGGCCCGGCGTTGAAGTTTGCCACCGCTACCGTCACCCGCGCC 35209
||||| || || || ||| ||||||| ||||| || | |||| |||||||
Sbjct 140 GTCGAGGAGGTCGGGCCGAGCCTGAAGTTCGCCACGGCCAAGGTCAACCGCGCC 87
>seq136878
Length=1830
Score = 187 bits (206), Expect = 6e-43
Identities = 246/341 (72%), Gaps = 0/341 (0%)
Strand=Plus/Minus
Query 34869 TCACCATCGTGGGCAACCTCACCGCCGACCCCGAACTGCGATATACCAATTCGGGCATTG 34928
||||| || | || ||||| ||||| || ||||||||||| | ||| || || |
Sbjct 386 TCACCGTCATCGGGAACCTGACCGCGGATCCCGAACTGCGTTTCACCCCGTCCGGTGCGG 327
Query 34929 CCGTCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCGGCAAGCCAACGAAT 34988
| || |||||||||||||| || ||||| || || | |||||||| || |||||||||
Sbjct 326 CGGTGGCCAACTTCACCGTTGCGTCCACGCCGCGGATGTTCGACCGTCAGACCAACGAAT 267
Query 34989 GGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGTCAGCCGGCCGAGAACG 35048
|||| ||||||||||| |||||| ||| ||| | ||||| || ||||||||||||
Sbjct 266 GGAAAGACGGCGAGGCACTGTTCATGCGGTGCAGCATCTGGCGGGAGGCGGCCGAGAACG 207
Query 35049 TGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCGTCCAGGGACGTCTCCGGGCGCGCA 35108
|||| || || ||||||| ||||| ||||| ||| || ||| | ||||
Sbjct 206 TGGCGGAGAGCCTCACCAAGGGTGCTCGTGTCATCGTGTCGGGTCGGCTCAAGCAGCGCT 147
Query 35109 GCTACGACGACCGCGACGGAAACCGTCGCACTGTGATCGGGATCGAAGTCGATGACGTGG 35168
|||||| |||||| || | ||||| ||| ||| | |||| ||||| || || |
Sbjct 146 CCTACGAAACCCGCGAGGGTGAGAAGCGCACGGTGGTCGAGCTCGAGGTCGAGGAGGTCG 87
Query 35169 GCCCGGCGTTGAAGTTTGCCACCGCTACCGTCACCCGCGCC 35209
| || || |||||| || ||||| | |||| |||||||
Sbjct 86 GTCCCTCGCTGAAGTACGCGACCGCCAAGGTCAACCGCGCC 46
>seq248049
Length=1043
Score = 149 bits (164), Expect = 2e-31
Identities = 246/350 (70%), Gaps = 10/350 (3%)
Strand=Plus/Plus
Query 34857 GCGAAACCCCTATCACCATCGTGGGCAACCTCACCGCCGACCCCGAACTGCGATATACCA 34916
|||| ||| ||||| | || |||||||| || ||||| ||||| ||||| | |||
Sbjct 560 GCGACACCATCATCACGGTGGTCGGCAACCTGACGGCCGATCCCGAGCTGCGCTTCACCG 619
Query 34917 ATTCGGGCATTGCCGTCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCG-G 34975
|| ||| ||||| || ||||||||||||||||| || || || || |||||||
Sbjct 620 CCTCCGGCGCGGCCGTTGCGAACTTCACCGTCGCATCGACCCCCCGGACGCTCGACCGCA 679
Query 34976 CAAGCCAACGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGTCAG 35035
| || | ||| |||||||||||||||||||| ||||||| |||| | ||||| |||
Sbjct 680 CCAG-CGGCGAGTGGAAGGACGGCGAGGCCCTCTTCCTGCGCTGCAACATCTGGCGGCAG 738
Query 35036 CCGGCCGAGAACGTGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCGTCCAGGGACGT 35095
| ||||||||||| | || ||||| || ||| || || |||||| || ||
Sbjct 739 GCTGCCGAGAACGTCACGGAGTCGCTCACCCGCGGCTCCCGCGTCATCGTCACCGGCCGG 798
Query 35096 CTCCGGGCGCGCAGCTACGACGACCGCGACGGAAACCG----TCGCACTGTGATCGGGAT 35151
||| | |||||||| ||| |||| | |||| || ||||| || |||| | |
Sbjct 799 CTCAAGCAGCGCAGCTTCGA-GACC---AAGGAAGGCGAGAAGCGCACCGTCATCGAGCT 854
Query 35152 CGAAGTCGATGACGTGGGCCCGGCGTTGAAGTTTGCCACCGCTACCGTCA 35201
|| ||||| || | ||||| || || || || ||||| | ||||
Sbjct 855 GGAGGTCGACGAGATCGGCCCCTCGCTGCGGTACGCGACCGCCAAGGTCA 904
>seq226360
Length=376
Score = 145 bits (160), Expect = 2e-30
Identities = 215/307 (70%), Gaps = 20/307 (7%)
Strand=Plus/Plus
Query 34868 ATCACCATCGTGGGCAACCTCACCGCCGACCCCGAACTGCGATATAC-CAATTCGGGCAT 34926
||||| | || |||||||| || |||||||| || ||||| || || || ||||| |
Sbjct 24 ATCACGGTGGTCGGCAACCTGACGGCCGACCCGGAGCTGCGCTACACGCAGAGCGGGC-T 82
Query 34927 TGCCGTCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCGGCAAGCCAACGA 34986
||||| || ||||||||| |||| ||| || |||| ||
Sbjct 83 CGCCGTGGCGAACTTCACCATCGCCAGCACCCCCCGCANN------------------GA 124
Query 34987 ATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGTCAGCCGGCCGAGAA 35046
|||||||||||||||||||||||||| | ||| |||||| || |||||| |
Sbjct 125 GTGGAAGGACGGCGAGGCCCTGTTCCTCCGGGCCTCCTGCTGGCGTGAGTTCGCCGAGCA 184
Query 35047 CGTGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCGTCCAGGGACGTCTCCGGGCGCG 35106
||| |||| |||||| ||||||||| || || |||| ||||| || || | |||
Sbjct 185 CGTCGCCGGGTCGCTGACCAAGGGCAGCCGCGTCATCGCGCAGGGCCGCCTGAAGCAGCG 244
Query 35107 CAGCTACGACGACCGCGACGGAAACCGTCGCACTGTGATCGGGATCGAAGTCGATGACGT 35166
| ||||||||||||||| || ||| ||||| | ||||| | |||| ||||| || |
Sbjct 245 CTCCTACGACGACCGCGATGGCAACAAGCGCACCGCGATCGAGCTCGAGGTCGACGAGAT 304
Query 35167 GGGCCCG 35173
||||||
Sbjct 305 CGGCCCG 311
>seq46609
Length=4533
Score = 89.7 bits (98), Expect = 1e-13
Identities = 172/249 (69%), Gaps = 5/249 (2%)
Strand=Plus/Minus
Query 857 TGGCGGGTGAAGGCGGCGAATCGTCGCGGTGGCCGTGGCGCCCGGCAGGTGAAGTTGGTG 916
|||| |||||||||||||| || | ||||||||| | | || ||| || |
Sbjct 3320 TGGCTCGTGAAGGCGGCGAACCGGAAGGCCGGCCGTGGCCTCT--CCGG-GAACCTGATC 3264
Query 917 CTGCTCGACGAGACCCGCGAGCAGCAGACGTGGGACGCGTGGGGCGCGATCACCAAGACC 976
||| | |||||| ||||||||||||| |||| || |||||||||||||| ||||||
Sbjct 3263 CTGATGGACGAGCTGCGCGAGCAGCAGAACTGGGCGGCCTGGGGCGCGATCACGAAGACC 3204
Query 977 ACGAACGCGGTGCCGGAGGCGCTGATCCT-GTGCACCTCCAACGCGGGCGATGCGTCTTC 1035
|| | ||| | || |||||||| | || || ||||| ||||| | | ||
Sbjct 3203 ACCCAGGCGCAGGACGACCTACTGATCCTCGCGC-TGTCGAACGCCGGCGACGTCGCGTC 3145
Query 1036 CGTGGTGCTGCGCTATTTGCGGTTGATGTGCCACAAGGCCCTGGGCGATCCGGACGGTGT 1095
|| ||||| || | ||||| | | | ||||| || | ||||| |||||||| |
Sbjct 3144 AGTCGTGCTCCGGCACCTGCGGATCAAGGCCCACATCGCGATCGGCGACCCGGACGGCAT 3085
Query 1096 GGCCGCCGA 1104
|||| |||
Sbjct 3084 CGCCGGCGA 3076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 121305144685918
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |