Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031120.1
Length=241147
Score E
Sequences producing significant alignments: (Bits) Value
seq76033 114 2e-20
seq263246 98.7 2e-15
seq243462 98.7 2e-15
seq259185 91.5 2e-13
>seq76033
Length=7108
Score = 114 bits (126), Expect = 2e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 196781 TCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCG 196840
|| || ||||| |||||||| ||||| || ||||||||||||| |||||||||||||||
Sbjct 6370 TCCTGCCAGCTCTATCAGCGCAGTGCCGACCTGTTCCTCGGTGTGCCGTTCAACATCGCG 6429
Query 196841 TCTTACGCATTGCTGATTCACATGGTGGCGCAACAGGTTAACATGGTACCGGGCGAGTTC 196900
|| || || |||| | |||||| |||| |||| | | | || ||||||
Sbjct 6430 TCCTATGCCCTGCTCACCCACATGATGGCCGCGCAGGCCGGCCTCGAGGTCGGTGAGTTC 6489
Query 196901 GTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGAACAG 196960
|| ||||| ||||| ||| |||||||||| ||| ||| | || ||||| | |||
Sbjct 6490 GTGTGGACCGGCGGGGACTGCCACATCTACGACAACCACGTCGACCAGGTGAGATTGCAG 6549
Query 196961 CTGTCTCGTAAACCGAAAGCGTTGCCGACGCTG 196993
|| || ||| | ||| | | | ||||| |||
Sbjct 6550 CTCTCGCGTGACCCGTACCCATACCCGACCCTG 6582
>seq263246
Length=351
Score = 98.7 bits (108), Expect = 2e-15
Identities = 116/152 (76%), Gaps = 4/152 (3%)
Strand=Plus/Plus
Query 196124 GACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGCGCTTCGATCTGCA 196182
||||| || ||||| ||||| | | | | ||||||| |||||||| ||||||||
Sbjct 185 GACCGCACAGGCACCGGCACGCTCAGCGTGT-TCGGCGCGCAGATGCGGTTCGATCTCGC 243
Query 196183 AGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCAT-GAAC 196241
| || ||||| || ||||||| ||||| ||||| || || || ||||| ||| ||||
Sbjct 244 GCAGGGCTTCCCCGTGCTCACCACCAAGAAGCTCCACCTCCGCTCGATCAT-CATCGAAC 302
Query 196242 TGCTGTGGTTCCTCAACGGGGACACCAACATC 196273
||||||||||||| ||| ||||||||| ||
Sbjct 303 TGCTGTGGTTCCTGCGCGGCGACACCAACGTC 334
>seq243462
Length=264
Score = 98.7 bits (108), Expect = 2e-15
Identities = 148/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 196115 GACAAAGCTGACCGTACCGGCACAGGCACTACGTCCTATCTCGGCGCAC-AGATGCGCTT 196173
||||| | || || ||||| || ||||| | | | |||| |||| ||||||| ||
Sbjct 207 GACAAGTCCGATCGCACCGGTACCGGCACCAGGAGCGTGTTCGG-GCACCAGATGCGGTT 149
Query 196174 CGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCAT 196233
||| ||| || || ||||||||||||||||||||||| | || ||||| || | ||
Sbjct 148 CGACCTGTCGGAGGGGTTCCCGCTGGTCACCACGAAGAAGGTGCACCTGCGGTCGGTGAT 89
Query 196234 TCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGG 196293
|| |||||||||||||| ||| || |||||| || | ||| | || |||
Sbjct 88 CGTCGAGCTGCTGTGGTTCCTGCGCGGCGAGACCAACGTCCGCTGGCTGCAGGAGCGCGG 29
Query 196294 TGTCTCTATCTGGAACGAGTGGGCGAAC 196321
|| | |||||| |||| |||||| ||
Sbjct 28 CGTGACGATCTGGGACGAATGGGCGGAC 1
>seq259185
Length=438
Score = 91.5 bits (100), Expect = 2e-13
Identities = 107/142 (75%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 196114 CGACAAAGCTGACCGTACCGGCACAGGCACTACGTCCTATCTCGGCGCAC-AGATGCGCT 196172
|||||| | ||||| |||||||| ||||| || ||| | |||| |||||||||
Sbjct 150 CGACAAGTCCGACCGCACCGGCACGGGCACC-CGCAGCGTCTTCGGGCACCAGATGCGCT 208
Query 196173 TCGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCA 196232
|||| || | | ||| ||||||||||| ||||||||| ||||| | || || |||
Sbjct 209 TCGACCTCGAGGCCGGCTTCCCGCTGGTGACCACGAAGCGGCTCCACGTCCGCTCGATCG 268
Query 196233 TTCATGAACTGCTGTGGTTCCT 196254
| || ||| |||||||||||||
Sbjct 269 TGCACGAATTGCTGTGGTTCCT 290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 768870133964760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |