Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq76033 114 2e-20 seq263246 98.7 2e-15 seq243462 98.7 2e-15 seq259185 91.5 2e-13 >seq76033 Length=7108 Score = 114 bits (126), Expect = 2e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 196781 TCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCG 196840 || || ||||| |||||||| ||||| || ||||||||||||| ||||||||||||||| Sbjct 6370 TCCTGCCAGCTCTATCAGCGCAGTGCCGACCTGTTCCTCGGTGTGCCGTTCAACATCGCG 6429 Query 196841 TCTTACGCATTGCTGATTCACATGGTGGCGCAACAGGTTAACATGGTACCGGGCGAGTTC 196900 || || || |||| | |||||| |||| |||| | | | || |||||| Sbjct 6430 TCCTATGCCCTGCTCACCCACATGATGGCCGCGCAGGCCGGCCTCGAGGTCGGTGAGTTC 6489 Query 196901 GTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGAACAG 196960 || ||||| ||||| ||| |||||||||| ||| ||| | || ||||| | ||| Sbjct 6490 GTGTGGACCGGCGGGGACTGCCACATCTACGACAACCACGTCGACCAGGTGAGATTGCAG 6549 Query 196961 CTGTCTCGTAAACCGAAAGCGTTGCCGACGCTG 196993 || || ||| | ||| | | | ||||| ||| Sbjct 6550 CTCTCGCGTGACCCGTACCCATACCCGACCCTG 6582 >seq263246 Length=351 Score = 98.7 bits (108), Expect = 2e-15 Identities = 116/152 (76%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 196124 GACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGCGCTTCGATCTGCA 196182 ||||| || ||||| ||||| | | | | ||||||| |||||||| |||||||| Sbjct 185 GACCGCACAGGCACCGGCACGCTCAGCGTGT-TCGGCGCGCAGATGCGGTTCGATCTCGC 243 Query 196183 AGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCAT-GAAC 196241 | || ||||| || ||||||| ||||| ||||| || || || ||||| ||| |||| Sbjct 244 GCAGGGCTTCCCCGTGCTCACCACCAAGAAGCTCCACCTCCGCTCGATCAT-CATCGAAC 302 Query 196242 TGCTGTGGTTCCTCAACGGGGACACCAACATC 196273 ||||||||||||| ||| ||||||||| || Sbjct 303 TGCTGTGGTTCCTGCGCGGCGACACCAACGTC 334 >seq243462 Length=264 Score = 98.7 bits (108), Expect = 2e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 196115 GACAAAGCTGACCGTACCGGCACAGGCACTACGTCCTATCTCGGCGCAC-AGATGCGCTT 196173 ||||| | || || ||||| || ||||| | | | |||| |||| ||||||| || Sbjct 207 GACAAGTCCGATCGCACCGGTACCGGCACCAGGAGCGTGTTCGG-GCACCAGATGCGGTT 149 Query 196174 CGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCAT 196233 ||| ||| || || ||||||||||||||||||||||| | || ||||| || | || Sbjct 148 CGACCTGTCGGAGGGGTTCCCGCTGGTCACCACGAAGAAGGTGCACCTGCGGTCGGTGAT 89 Query 196234 TCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGG 196293 || |||||||||||||| ||| || |||||| || | ||| | || ||| Sbjct 88 CGTCGAGCTGCTGTGGTTCCTGCGCGGCGAGACCAACGTCCGCTGGCTGCAGGAGCGCGG 29 Query 196294 TGTCTCTATCTGGAACGAGTGGGCGAAC 196321 || | |||||| |||| |||||| || Sbjct 28 CGTGACGATCTGGGACGAATGGGCGGAC 1 >seq259185 Length=438 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 196114 CGACAAAGCTGACCGTACCGGCACAGGCACTACGTCCTATCTCGGCGCAC-AGATGCGCT 196172 |||||| | ||||| |||||||| ||||| || ||| | |||| ||||||||| Sbjct 150 CGACAAGTCCGACCGCACCGGCACGGGCACC-CGCAGCGTCTTCGGGCACCAGATGCGCT 208 Query 196173 TCGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCA 196232 |||| || | | ||| ||||||||||| ||||||||| ||||| | || || ||| Sbjct 209 TCGACCTCGAGGCCGGCTTCCCGCTGGTGACCACGAAGCGGCTCCACGTCCGCTCGATCG 268 Query 196233 TTCATGAACTGCTGTGGTTCCT 196254 | || ||| ||||||||||||| Sbjct 269 TGCACGAATTGCTGTGGTTCCT 290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 768870133964760