Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031927.1
Length=216121
Score E
Sequences producing significant alignments: (Bits) Value
seq244739 120 4e-22
seq222154 100 4e-16
seq36828 86.0 9e-12
>seq244739
Length=1400
Score = 120 bits (132), Expect = 4e-22
Identities = 235/344 (68%), Gaps = 4/344 (1%)
Strand=Plus/Plus
Query 162496 GAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAA 162555
||||| ||||||| || || || || | || || || || || || || || || ||
Sbjct 333 GAGACGCCCCAGACCGAGACGACGCCGTTCTACCCGCGGTCGCCGTACGGTGTCGCGAAG 392
Query 162556 CTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGC 162615
|| || |||||||||||| ||||||||||| | || || | || | || | || |
Sbjct 393 CTGTACGGGTTCTGGATCGTCAAAAACTACCGTGAGTCGTACGGTATGTACGCTTGTAAC 452
Query 162616 GGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATC 162675
|| ||||| ||||||||||| || | ||| | || ||||||||||| || ||||||
Sbjct 453 GGCATTCTCTTCAATCACGAGAGTCCGCGCCGTGGTCGCACGTTCGTCACTCGGAAGATC 512
Query 162676 GTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCA-AAGTG-ATCTACAACTTGGAAACC 162733
|| || || | || | | || | || ||| ||||| || || || |
Sbjct 513 TCTCGCGCGGTGGCTGAGATCAAGCTCGGCCAGCAGCCGTGCCTCTAC--CTCGGCAATC 570
Query 162734 TCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGC 162793
| ||| |||||||||||||| || |||||||| |||| ||||||| |||||
Sbjct 571 TGTCGGCCAAGCGTGACTGGGGACATGCGCGTGACTACGTCGAGGGTATGTGGCAGATGC 630
Query 162794 TTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGGTGAG 162837
||||||| || |||| || || | || |||| || || |||
Sbjct 631 TTCAGCAGGACCAGCCGGACGACTTCGTTCTCGCGACCGGCGAG 674
>seq222154
Length=451
Score = 100 bits (110), Expect = 4e-16
Identities = 69/77 (90%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 142793 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAG 142851
||||||||||||||| ||| |||||||||||| ||||| |||||| ||||| |||||||
Sbjct 64 GGGGAATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAAGGGTTCGAC 123
Query 142852 TCCGTTATTCTCCACCA 142868
||| |||||||||||||
Sbjct 124 TCCCTTATTCTCCACCA 140
>seq36828
Length=6619
Score = 86.0 bits (94), Expect = 9e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 142792 CGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAG 142851
||||| |||||||| ||||||||||||||||||||||||||||| |||| |||||||
Sbjct 4122 CGGGGCCTTAGCTCAATTGGTAGAGCGCCTGCTTTGCAAGCAGGAGGTCAGGGGTTCGAT 4063
Query 142852 TCCGTTATTCTCCAC 142866
||| || ||||||
Sbjct 4062 TCCCCTAGGCTCCAC 4048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 689064305131080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |