Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq103 212 9e-53 seq143815 116 6e-24 >seq103 Length=7362 Score = 212 bits (234), Expect = 9e-53 Identities = 186/226 (82%), Gaps = 7/226 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | Sbjct 2810 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTAGGAATT-C 2753 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | | |||||||| | ||||||| ||||| | | |||||| | || Sbjct 2752 CTCGTTTATGGGGGATAATTGCAAACCCCAATCCCCAGCACGAAGGAGTTTCAACGGGTT 2693 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| | ||||| || || || | ||| | | ||||||||||||||||||| Sbjct 2692 GCCCGGGCCTCTAGGCCAGGGAGA---ACATGCTGATTCCTTCAGTGTAGCGCGCGTGCG 2636 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 2635 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 2591 >seq143815 Length=214 Score = 116 bits (128), Expect = 6e-24 Identities = 86/98 (88%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 6 AAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGT 65 ||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| |||||| Sbjct 103 AAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-CCTCGT 160 Query 66 TGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 |||||| ||| |||||||||| |||||||||| ||||| Sbjct 161 TGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGA 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750878408685