Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq97242 284 2e-74
seq97243 277 3e-72
seq149161 210 4e-52
seq103 168 1e-39
>seq97242
Length=270
Score = 284 bits (314), Expect = 2e-74
Identities = 166/172 (97%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||
Sbjct 99 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAACCGCATGCCCTTCACTGGGCGTGTTGGGGA 158
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 159 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 218
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGG 176
||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 219 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGG 270
>seq97243
Length=349
Score = 277 bits (306), Expect = 3e-72
Identities = 161/166 (97%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 153 GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGT 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 349 GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGCAT 290
Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 289 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 230
Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 229 CATTTGCCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 184
>seq149161
Length=220
Score = 210 bits (232), Expect = 4e-52
Identities = 131/138 (95%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGG 132
|||||| ||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||
Sbjct 142 TTTACTGTGAGAAAATTAGAGTGTTCAAAGCAGGCGTTTCGCTCGAATATATTAGCATGG 83
Query 133 AATAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 82 AATAATAGAATAGGACGTTGCGGTCCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 23
Query 192 AATAGGGATAGTCGGGGG 209
||||||||||||||||||
Sbjct 22 AATAGGGATAGTCGGGGG 5
>seq103
Length=7362
Score = 168 bits (186), Expect = 1e-39
Identities = 193/255 (76%), Gaps = 11/255 (4%)
Strand=Plus/Plus
Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT------GCTCGAATACATTA 126
|||||||||||| ||||||||||| ||||||| ||| ||| ||||| |
Sbjct 1882 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCCGCTTGAATATTTCG 1941
Query 127 -GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC--CGCCG 183
|||||||||||||||||| || | |||||||||||||||||||| || || || |
Sbjct 1942 TGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGG 2000
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||||||||| ||||| | ||||| || ||||||||||||||||
Sbjct 2001 TAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTG 2060
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
||| ||||| ||| | |||||||| || |||| | ||||||||| ||||| |
Sbjct 2061 GATCGTCGCAAGACGAACATCAGCGAAAGCATTTGCCAAAGGTGTTTTCATCAATCA-AG 2119
Query 304 AACGAAAGTTAGGGG 318
|||||||||||| ||
Sbjct 2120 AACGAAAGTTAGAGG 2134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 913790967232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |