Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq97242 284 2e-74 seq97243 277 3e-72 seq149161 210 4e-52 seq103 168 1e-39 >seq97242 Length=270 Score = 284 bits (314), Expect = 2e-74 Identities = 166/172 (97%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| Sbjct 99 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAACCGCATGCCCTTCACTGGGCGTGTTGGGGA 158 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 159 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 218 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGG 176 ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 219 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGG 270 >seq97243 Length=349 Score = 277 bits (306), Expect = 3e-72 Identities = 161/166 (97%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 153 GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGT 212 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 349 GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGCAT 290 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 289 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 230 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | || |||||||||||||||||||||||||||||||||||||||| Sbjct 229 CATTTGCCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 184 >seq149161 Length=220 Score = 210 bits (232), Expect = 4e-52 Identities = 131/138 (95%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGG 132 |||||| ||| |||||||||||||||||||||||| ||| ||||||||| |||||||||| Sbjct 142 TTTACTGTGAGAAAATTAGAGTGTTCAAAGCAGGCGTTTCGCTCGAATATATTAGCATGG 83 Query 133 AATAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 82 AATAATAGAATAGGACGTTGCGGTCCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 23 Query 192 AATAGGGATAGTCGGGGG 209 |||||||||||||||||| Sbjct 22 AATAGGGATAGTCGGGGG 5 >seq103 Length=7362 Score = 168 bits (186), Expect = 1e-39 Identities = 193/255 (76%), Gaps = 11/255 (4%) Strand=Plus/Plus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT------GCTCGAATACATTA 126 |||||||||||| ||||||||||| ||||||| ||| ||| ||||| | Sbjct 1882 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCCGCTTGAATATTTCG 1941 Query 127 -GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC--CGCCG 183 |||||||||||||||||| || | |||||||||||||||||||| || || || | Sbjct 1942 TGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGG 2000 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||||||| ||||| | ||||| || |||||||||||||||| Sbjct 2001 TAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTG 2060 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||| ||||| ||| | |||||||| || |||| | ||||||||| ||||| | Sbjct 2061 GATCGTCGCAAGACGAACATCAGCGAAAGCATTTGCCAAAGGTGTTTTCATCAATCA-AG 2119 Query 304 AACGAAAGTTAGGGG 318 |||||||||||| || Sbjct 2120 AACGAAAGTTAGAGG 2134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 913790967232