Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq95903 554 2e-155
seq95904 446 7e-123
seq133442 217 6e-54
seq103 138 5e-30
>seq95903
Length=751
Score = 554 bits (614), Expect = 2e-155
Identities = 442/523 (85%), Gaps = 22/523 (4%)
Strand=Plus/Plus
Query 77 GTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATC 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 GTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATC 298
Query 137 GAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 299 GAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTAAAAGGGAA 358
Query 197 GCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTC 256
| | |||||||||||||||| ||| | || || |||| | | ||||| |||| |
Sbjct 359 GGGATTGCAACCAGACTTGCTCGC-GGTGTTCCGCCGGTCTTCTGACCGGTCTACTC-GC 416
Query 257 TGCGGT-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCC 315
||| | |||||||||||| || | || | |||| ||| | ||||||| || |||
Sbjct 417 CGCGTTGCAGGCCAGCATCGTCTGGTGCCGCTGGAT-AAGACTTGAGGAATGTAGCTCCC 475
Query 316 TTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTC 374
| ||| ||||||||||| ||| |||| || || | || | ||||||||||||
Sbjct 476 T--CGGGAGTGTTATAGCCTCTTGTG--ATGCAGCGAGCGCCGGGC-GAGGTCCGCGCTT 530
Query 375 CGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAG---- 430
|||||||||||||||||||||||| |||| | |||||||||| |||||||||||||
Sbjct 531 CGGCTAGGATGCTGGCGTAATGGTCGTAATCCGCCCGTCTTGAAACACGGACCAAGNNNN 590
Query 431 ------GAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAG 484
|||||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct 591 NNNNNNNNGTCTAACATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAG 650
Query 485 TGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGG 544
|||||||||||| ||||| | |||||| |||||||||||||||||||||||||||||
Sbjct 651 TGAACGGAGGTGAGAACC--GCAAGGTGCATCATCGACCGATCCTGATGTCTTCGGATGG 708
Query 545 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 709 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 751
>seq95904
Length=586
Score = 446 bits (494), Expect = 7e-123
Identities = 343/402 (85%), Gaps = 6/402 (1%)
Strand=Plus/Minus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 396 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 337
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 336 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 277
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 276 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCATGCAAC 217
Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGC 267
|||||||| || | || || |||| | | ||||| |||| | || | |||||
Sbjct 216 CAGACTTG-TCGGTGGTGTTCCGCCGGTCTTCTGACCGGTCTACTC-GCCGCCGACAGGC 159
Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327
||||||| | || | ||||||||||||| || ||||| || || || || ||||
Sbjct 158 CAGCATCGTTTGGGATCGCCGGATAAAGGCCCTGGAAATGTAGCTCC--TC--GGAGTGT 103
Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387
||||| || || ||| |||| | | || |||||||||||| |||||||||||||
Sbjct 102 TATAGTCCTAGGCACAATACGGCGCATCCCGAGCGAGGTCCGCGCTTCGGCTAGGATGCT 43
Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429
||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct 42 GGCGTAATGGTCGTATGCGGCCCGTCTTGAAACACGGACCAA 1
>seq133442
Length=317
Score = 217 bits (240), Expect = 6e-54
Identities = 141/155 (91%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 43 TCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATT 102
|||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||
Sbjct 1 TCGAGTTGTTTGGGAATGCAGCTCAAAATGGGCGGTAAATTCCATCTAAAGCTAAATATT 60
Query 103 GGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGA 162
|| ||||||||||||| ||||||| |||||| ||||||||||||| |||||| |||||
Sbjct 61 GGGGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGA 120
Query 163 GAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197
||||||||||| ||||||||||||||||| |||||
Sbjct 121 GAGTTAAAAAGTACGTGAAATTGTTGAAATGGAAG 155
>seq103
Length=7362
Score = 138 bits (152), Expect = 5e-30
Identities = 108/129 (84%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||| || || |||||||||||||||||||||||||||||| ||| |||| ||| |
Sbjct 5585 GAGCACAGATGCTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGGG 5644
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||||
Sbjct 5645 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTA 5704
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 5705 TAGGGGCGA 5713
Score = 136 bits (150), Expect = 2e-29
Identities = 116/143 (81%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| |||||||
Sbjct 4767 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 4826
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
||| | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| |
Sbjct 4827 ATTACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 4886
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
|||||||| || || ||||||||
Sbjct 4887 AGAGAGTTCAAGAGTACGTGAAA 4909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2076697579450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |