Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq95903 554 2e-155 seq95904 446 7e-123 seq133442 217 6e-54 seq103 138 5e-30 >seq95903 Length=751 Score = 554 bits (614), Expect = 2e-155 Identities = 442/523 (85%), Gaps = 22/523 (4%) Strand=Plus/Plus Query 77 GTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATC 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 239 GTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATC 298 Query 137 GAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 299 GAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTAAAAGGGAA 358 Query 197 GCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTC 256 | | |||||||||||||||| ||| | || || |||| | | ||||| |||| | Sbjct 359 GGGATTGCAACCAGACTTGCTCGC-GGTGTTCCGCCGGTCTTCTGACCGGTCTACTC-GC 416 Query 257 TGCGGT-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCC 315 ||| | |||||||||||| || | || | |||| ||| | ||||||| || ||| Sbjct 417 CGCGTTGCAGGCCAGCATCGTCTGGTGCCGCTGGAT-AAGACTTGAGGAATGTAGCTCCC 475 Query 316 TTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTC 374 | ||| ||||||||||| ||| |||| || || | || | |||||||||||| Sbjct 476 T--CGGGAGTGTTATAGCCTCTTGTG--ATGCAGCGAGCGCCGGGC-GAGGTCCGCGCTT 530 Query 375 CGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAG---- 430 |||||||||||||||||||||||| |||| | |||||||||| ||||||||||||| Sbjct 531 CGGCTAGGATGCTGGCGTAATGGTCGTAATCCGCCCGTCTTGAAACACGGACCAAGNNNN 590 Query 431 ------GAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAG 484 |||||||||||||||||||||| ||||||||||||| | ||||||||||||| Sbjct 591 NNNNNNNNGTCTAACATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAG 650 Query 485 TGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGG 544 |||||||||||| ||||| | |||||| ||||||||||||||||||||||||||||| Sbjct 651 TGAACGGAGGTGAGAACC--GCAAGGTGCATCATCGACCGATCCTGATGTCTTCGGATGG 708 Query 545 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 709 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 751 >seq95904 Length=586 Score = 446 bits (494), Expect = 7e-123 Identities = 343/402 (85%), Gaps = 6/402 (1%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 396 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 337 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 336 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 277 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 276 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCATGCAAC 217 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGC 267 |||||||| || | || || |||| | | ||||| |||| | || | ||||| Sbjct 216 CAGACTTG-TCGGTGGTGTTCCGCCGGTCTTCTGACCGGTCTACTC-GCCGCCGACAGGC 159 Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327 ||||||| | || | ||||||||||||| || ||||| || || || || |||| Sbjct 158 CAGCATCGTTTGGGATCGCCGGATAAAGGCCCTGGAAATGTAGCTCC--TC--GGAGTGT 103 Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387 ||||| || || ||| |||| | | || |||||||||||| ||||||||||||| Sbjct 102 TATAGTCCTAGGCACAATACGGCGCATCCCGAGCGAGGTCCGCGCTTCGGCTAGGATGCT 43 Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429 ||||||||||| ||| ||||||||||||| |||||||||||| Sbjct 42 GGCGTAATGGTCGTATGCGGCCCGTCTTGAAACACGGACCAA 1 >seq133442 Length=317 Score = 217 bits (240), Expect = 6e-54 Identities = 141/155 (91%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 43 TCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATT 102 |||||||||||||||||||||||| ||||||| |||||||| | |||||||||||||||| Sbjct 1 TCGAGTTGTTTGGGAATGCAGCTCAAAATGGGCGGTAAATTCCATCTAAAGCTAAATATT 60 Query 103 GGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGA 162 || ||||||||||||| ||||||| |||||| ||||||||||||| |||||| ||||| Sbjct 61 GGGGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGA 120 Query 163 GAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||||||||||| ||||||||||||||||| ||||| Sbjct 121 GAGTTAAAAAGTACGTGAAATTGTTGAAATGGAAG 155 >seq103 Length=7362 Score = 138 bits (152), Expect = 5e-30 Identities = 108/129 (84%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| || || |||||||||||||||||||||||||||||| ||| |||| ||| | Sbjct 5585 GAGCACAGATGCTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGGG 5644 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||| Sbjct 5645 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTA 5704 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 5705 TAGGGGCGA 5713 Score = 136 bits (150), Expect = 2e-29 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 4767 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 4826 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 4827 ATTACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 4886 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 4887 AGAGAGTTCAAGAGTACGTGAAA 4909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2076697579450