Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq690 351 2e-94 seq111753 152 9e-35 >seq690 Length=1526 Score = 351 bits (388), Expect = 2e-94 Identities = 248/281 (88%), Gaps = 2/281 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||||| | |||||||||||||||||||||||||||| Sbjct 776 TACTGAGCAGTATTACTATCGCAACGACGAGCCATCAGTAGGGTAAAACTAACCTGTCTC 835 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 836 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 895 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 896 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 955 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 956 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 1014 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | ||| || ||||||||||||||||||| ||||| Sbjct 1015 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 1055 >seq111753 Length=235 Score = 152 bits (168), Expect = 9e-35 Identities = 84/84 (100%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 235 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 176 Query 272 CACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||| Sbjct 175 CACACTTTCATGGTTTGTATTCAC 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853084574304