Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq131609 412 1e-112 >seq131609 Length=638 Score = 412 bits (456), Expect = 1e-112 Identities = 292/334 (87%), Gaps = 9/334 (3%) Strand=Plus/Plus Query 265 CGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATAC 324 |||||||||||| ||||||||||||||||||||||||||||| | | ||| ||||| | Sbjct 289 CGCTTCAACCTGGCCATGGATAGATCACTTCGCTTCGGGTCTAGGACATGCGACTCAATC 348 Query 325 GCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAAC 384 ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| | | Sbjct 349 GCCCTATTCAGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCCACATATC 408 Query 385 GCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTT 444 || ||||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct 409 GCTAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCAC-----AGCTACCAGG----G 459 Query 445 CAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTA 504 | |||||||||| ||||| ||| | ||||||||||||||||||||||||| || |||||| Sbjct 460 CTGCTCCGACGGTTTGTAAGCAAACGGTTTCAGGTACTATTTCACTCCCCTCCCGGGGTA 519 Query 505 CTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTT 564 ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 520 CTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCATCTGGGAGTATTTAGGCTT 579 Query 565 AACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598 | | |||||||| | |||||||||||| ||||| Sbjct 580 ATCAGGTGGTCCTGACAGATTCACACGGGATTTC 613 Score = 259 bits (286), Expect = 2e-66 Identities = 180/202 (89%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||||| | |||||| |||||| ||||||||| || |||||||||||| |||||||||| Sbjct 54 TCGACTATGAAGCTTA-TCCCCCACAGTCTCACTGCTGCGCTCTCACTTACCGGCATTCG 112 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119 |||||||| ||| || |||| || |||| ||| | | ||||||||| ||||||||||| Sbjct 113 GAGTTTGGCTGACGTCAGTAACCTGTTGGGGCCCATCGGCCATCCAGTAGCTCTACCTCC 172 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 || ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct 173 GGCAAGAAACACGCAACGCTGCACCTAAATGCATTTCGGAGAGAACCAGCTATCACGAAG 232 Query 180 TTTGATTGGCCTTTCACCCCTA 201 |||||||||||||||||||||| Sbjct 233 TTTGATTGGCCTTTCACCCCTA 254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1814801641216