Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq131609 196 1e-47 seq151523 105 2e-20 seq103 80.6 7e-13 >seq131609 Length=638 Score = 196 bits (216), Expect = 1e-47 Identities = 256/344 (74%), Gaps = 8/344 (2%) Strand=Plus/Plus Query 78 TTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGA-C 136 ||||||||| |||| ||||||||| | | || |||||||| | |||||| | | Sbjct 292 TTCAACCTGGCCAT-GGATAGATCACTTCGCTT-CGGGTCTAGGACAT-GCGACTCAATC 348 Query 137 GCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAA 196 |||||| | ||||||||||| ||||||| || ||| | ||| | | | | ||||| | Sbjct 349 GCCCTATTCAGACTCGCTTT-CGCTACGGCTACCCCACACGGGTTAACCTCGCCACATAT 407 Query 197 AA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACC-CAACAAAGTGGGCTCCC 254 ||| |||| | | |||| | ||||||| |||| ||||| | || | | ||||| Sbjct 408 CGCTAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACAGCTACCAGGGCTGCTCCG 467 Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCG 314 || | ||||| ||| ||||||||||| |||||||||||||||| ||||||| |||||| Sbjct 468 ACGGTTTGTAAGCAAACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGGGTACTTTTCA 526 Query 315 CCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGAT 374 |||||||||||||||||| || | |||||||||| | ||||||||| ||| | | Sbjct 527 CCTTTCCCTCACGGTACTTGTCCGCTATCGGTCATCTGGGAGTATTTAGGCTTATCAGGT 586 Query 375 GGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||||| || ||||| || ||||||| || |||| ||||| Sbjct 587 GGTCCTGACAGATTCACACGGGATTTCTCGGGCCCCGTGCTACT 630 >seq151523 Length=212 Score = 105 bits (116), Expect = 2e-20 Identities = 77/87 (89%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 144 TAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAGT 203 ||||||||| ||| | ||||| ||||||||||||||||| ||| || || || |||||| Sbjct 207 TAAGACTCGGTTTCC-CTACGGCTCCCCTATTCGGTTAACCTT-GCTACAAAATATAAGT 150 Query 204 CGCTGACCCATTATACAAAAGGTACGC 230 ||||||||||||||||||||||||||| Sbjct 149 CGCTGACCCATTATACAAAAGGTACGC 123 >seq103 Length=7362 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 4913 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 4855 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| | ||| ||||||||||| || Sbjct 4854 ACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTTAGA 4814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1239688445056