Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq97242 190 2e-46 seq149161 181 1e-43 seq97243 145 8e-33 seq103 98.7 1e-18 >seq97242 Length=270 Score = 190 bits (210), Expect = 2e-46 Identities = 111/115 (97%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 156 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 215 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGG 115 ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct 216 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGG 270 >seq149161 Length=220 Score = 181 bits (200), Expect = 1e-43 Identities = 126/139 (91%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATACATTACCATGG 71 |||||| ||| |||||||||| ||||||||||||| ||| ||||||||| |||| ||||| Sbjct 142 TTTACTGTGAGAAAATTAGAGTGTTCAAAGCAGGCGTTTCGCTCGAATATATTAGCATGG 83 Query 72 AATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 ||||||||||||||||| |||||| ||||||||| |||||||||||||| |||||||||| Sbjct 82 AATAATAGAATAGGACGTTGCGGTCCTATTTTGTTGGTTTCTAGGACCG-CCGTAATGAT 24 Query 131 AAATACGGATAGTCGGGGG 149 |||| ||||||||||||| Sbjct 23 TAATAGGGATAGTCGGGGG 5 >seq97243 Length=349 Score = 145 bits (160), Expect = 8e-33 Identities = 93/100 (93%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 92 GGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTG 151 ||||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||| Sbjct 349 GGTTCTATTTTGTTGGTTTCTAGGACCGCC-GTAATGATTAATAGGGATAGTCGGGGGCA 291 Query 152 TCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTATT 191 ||||||||||||||||| |||||||||||||||||||||| Sbjct 290 TCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 >seq103 Length=7362 Score = 98.7 bits (108), Expect = 1e-18 Identities = 135/185 (73%), Gaps = 13/185 (7%) Strand=Plus/Plus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACATTA 65 |||||||||||| ||||||||| | ||||||| ||| ||| |||| ||| Sbjct 1882 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCCGCTTGAAT--ATTT 1939 Query 66 C---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC-CGCC 121 | ||||||||||||||||| || | |||||||||||||| ||||| || || | Sbjct 1940 CGTGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGA 1998 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||||| ||||| | ||||| || | |||||||||||| Sbjct 1999 GGTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 2058 Query 182 TGGAT 186 ||||| Sbjct 2059 TGGAT 2063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511236363360