Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq152933 159 6e-37 seq690 78.8 2e-12 >seq152933 Length=210 Score = 159 bits (176), Expect = 6e-37 Identities = 141/175 (81%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 104 AGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAAT 163 |||||||||||||||||||||||||||| | ||||||||| | | |||| ||||| Sbjct 1 AGTCAGAATCCATGCCAGAACGGGGTGAGTTATGCCTGCACATTGATGCTGGATGCGAAT 60 Query 164 AGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGC 223 |||||||||||| |||||||| |||| | ||||||| ||||| |||| ||| || Sbjct 61 AGGCTTCGGCCCAGAACCTTACCAGGTCAGCAACGGCAGTCCCATGGAAATTGGGGCTGC 120 Query 224 TCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || ||||||| || ||||||| || |||| ||||| ||||||||||||||||| Sbjct 121 TC-GCTGGCGAATAGCAATTTAACAGCGCGCTGGGATGAATCCTTTGCAGACGAC 174 >seq690 Length=1526 Score = 78.8 bits (86), Expect = 2e-12 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 778 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 721 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 720 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 817978181376