Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq7375 123 2e-23 seq4562 120 2e-22 >seq7375 Length=9560 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || |||||||| || || || |||| || ||| ||| || || ||||| || | Sbjct 4637 TTATTCAATGCAATTGAAACTCTACCATGTGTTAAGAAGAAGGCAGACTGGGCGTTACAG 4696 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 |||||| ||| | |||||||||||||| ||||| | | || ||||| | ||| ||| Sbjct 4697 TGGATCGGCAGCAAGACGGCTACATTTGGAGAACGTATAATTGCTTTTGCAGCGGTTGAG 4756 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || |||||||| || ||||| |||| ||||||||||| ||||| || || ||| Sbjct 4757 GGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGAGGTCTGATG 4816 Query 61576 CCCGGTCTGACCTTCAGCAATGA 61598 ||||| |||| ||||||||||| Sbjct 4817 CCCGGATTGACTTTCAGCAATGA 4839 >seq4562 Length=21325 Score = 120 bits (132), Expect = 2e-22 Identities = 881/1415 (62%), Gaps = 48/1415 (3%) Strand=Plus/Minus Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521 || || || || || | ||||||||| |||||||||||||| |||||||| |||||||| Sbjct 20702 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 20643 Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGA 65581 ||||| ||||| ||||| | ||| | || || ||||| || | || | || || | Sbjct 20642 GCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCT 20583 Query 65582 CGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGT 65641 | | |||||| ||| | ||| | | | || | | ||||||||| | Sbjct 20582 TTAAGGACAGCCCAGTCCCAAA--GGTCTGTAG--GAGTT--TTGTCCCACATATCATAC 20529 Query 65642 TGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTG 65701 || ||| | || || || || || | | | ||| | || || | | Sbjct 20528 TGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCA 20469 Query 65702 GCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTA 65761 || | || ||| || | || ||||| || ||||||| || || || || || |||| Sbjct 20468 GCTAATTCACAACTAGCTTCTAGTGCACCATAATAAATAGTTTCAAATATTTGTTGATTG 20409 Query 65762 AGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGA 65821 || ||| | || || ||||| | || | ||||| ||||| | || |||| Sbjct 20408 AGAAGTATTGCTTTCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATG 20349 Query 65822 CCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACA 65881 || ||||| |||||||| || || | ||| | || ||| ||| | | || ||||| ||| Sbjct 20348 CCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACA 20289 Query 65882 GGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGT 65941 || || |||| | ||| |||| || ||||| | || || | | ||| | Sbjct 20288 GGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCT 20229 Query 65942 CGCAATTGTTCGAAATCAAA-ATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTT 66000 |||| || |||| ||| |||| || | |||||| | Sbjct 20228 TTTAATTTTTTAAAATTAAATCTGTT-------AT------------TTTCAACAAACAT 20188 Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060 | ||| || | || || |||||||| || || | || || | || || | || Sbjct 20187 GTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCAC 20128 Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCG 66120 || || ||||| ||||| || || || ||||| | ||| | |||||||||||| | Sbjct 20127 AACCTCTGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCT 20068 Query 66121 ATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180 || || |||||||| |||| |||||| || || || ||||| ||||||| || || || Sbjct 20067 GTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAAT 20008 Query 66181 GGCGTGCCAAA------GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTC 66234 | | ||| | |||| | || ||| || | || ||| ||| Sbjct 20007 TGACTTCCATAACTCTTGAGCTC-TGACTT-GTTTTATAAATCG-------TTTTTCTTC 19957 Query 66235 GTAATGTTCG---TAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291 | || || | || | | ||| || || || | || | || | |||| Sbjct 19956 TTCATATTTGGTATATAATTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACT 19897 Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351 | || |||||||| || |||| | |||| | |||||| | |||||| ||||| Sbjct 19896 GTCATGAGGACACATGAGACTCCAAACTTCATCTTTTTCTACTCTTTTCATAAACAGATC 19837 Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTT 66410 |||||||| | || || || || || | |||| || || | || ||| || | Sbjct 19836 TGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-TTCT 19778 Query 66411 TGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACG 66470 | || || | ||| ||||| ||||| |||||||| || || | || || || || | Sbjct 19777 TCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGGCTCTAAATAAATTGCAAATG 19718 Query 66471 AGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCA 66530 ||| ||||||| |||||||| || || || | || |||||| | || | || Sbjct 19717 CGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCA 19658 Query 66531 ACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCC 66590 |||| || || || || || || ||||| ||||| | ||| || || | || | Sbjct 19657 ACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAAGAACCCTGAGCTC 19598 Query 66591 GTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGG 66650 || || || | ||| || ||||| || | || || || ||||| | Sbjct 19597 TGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTT 19538 Query 66651 CCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAAC 66710 | || || || || |||||| || | || || | | ||| | || || Sbjct 19537 TTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAACAGGAGG 19478 Query 66711 TAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAAT 66770 ||| || || |||||||| || ||||| || || || | || || ||||| || | Sbjct 19477 AAAGCTGTGGCCGCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATT 19418 Query 66771 GGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA 66830 ||||| ||| || || | ||| || |||||||| ||| |||||||| || | Sbjct 19417 TCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATGCCTA 19358 Query 66831 GTGCACA-TCGCATCAGGAGGTATTGAGGCCGTTC 66864 || | | || ||| || | || |||||||| ||| Sbjct 19357 -TGGAGACTCTCATAAGCATGTGTTGAGGCCTTTC 19324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396822013219760