Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_033851.1 Length=1869 Score E Sequences producing significant alignments: (Bits) Value seq122353 107 2e-20 >seq122353 Length=1506 Score = 107 bits (118), Expect = 2e-20 Identities = 228/335 (68%), Gaps = 4/335 (1%) Strand=Plus/Plus Query 525 ACATCCCCGGGACTACCATATATCAATACCCATCCTGGATGGAAGAAAGGGGACATTTCT 584 || || || ||||| |||||||||| || || ||||| |||||||| || ||| || Sbjct 348 ACTTCTCCTGGACTTCCATATATCAGGACACACCCTGGTAAAAAGAAAGGAGATATT-CT 406 Query 585 CTAAAGTAC-ATGCCTGCATTTAATAATTATTGGGATAGAGTTGGACAAGGCCTACCAGT 643 |||| | || | |||| ||||||||||| | || ||||| | | || Sbjct 407 AGAAAGAAATATAGATAAATTTTCAAATTATTGGGAGCGCGTAGGACATAATC-AGAAGA 465 Query 644 CG-CGCCTTTACCAGATTGTGCAGCTTTTGCCAGAAGCCACATTAGCTCACCTGATGTTA 702 | | |||||||| |||||||| ||||| || | || || ||| || | || | || Sbjct 466 CTACCCCTTTACCTGATTGTGCCGCTTTCGCTCGCAGTCATATTGGCAAAGTTGGTACTA 525 Query 703 ACAAAGTCCGACCAGTTTGGGCATATCCCATGATGGCGATTGCACAGGAATCTCGTTTTG 762 | |||||||| ||||||||||| ||||| || | || | | ||| || | |||| Sbjct 526 ATAAAGTCCGGCCAGTTTGGGCTTATCCTATAGAAGTAATAGTTGAAGAAGCTAGATTTG 585 Query 763 TAGCCCCCTTACTGCGAGATTTAATTGATCAGAAAATTGGTCTACATACCGCCTATGGCA 822 | |||||| | || || ||| | | ||| | || ||| | | || ||||||| Sbjct 586 CTGTCCCCTTCCAGCAAGCATTAGTAAAACAGGACATAGGTAGAGAATTTGCTTATGGCA 645 Query 823 TGGAAATGATGAAAGGAGGAATGACTTGGCTGAAC 857 |||| | | |||||||||||||| ||||| ||| Sbjct 646 TGGAGTTATTAAAAGGAGGAATGACATGGCTCAAC 680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5862394497990