Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq89201 358 2e-96 >seq89201 Length=1645 Score = 358 bits (396), Expect = 2e-96 Identities = 411/543 (76%), Gaps = 20/543 (4%) Strand=Plus/Minus Query 52 CGGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTG-GGCCCCCTAGACCATCCAGTGC 110 ||| |||||||||||| | | ||||||| | |||||||||| | | |||||| Sbjct 814 CGGTATTCGGAGTTTGCATCGGGTTGGTAAGCCGGGATGGCCCCCTAGCCGAAACAGTGC 755 Query 111 TCTACCTCCGG-GAAGAAA-CACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAG 168 |||||| ||| || || |||| | |||| |||||||| |||||||||||||||| Sbjct 754 TCTACCCCCGAAGATGAGTTCACGAGGCGCT--ACCTAAATAGCTTTCGGGGAGAACCAG 697 Query 169 CTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAA 228 ||||| | ||||||||||||||||||||| | ||||| ||||||| || | ||||||| Sbjct 696 CTATCTCCCGGTTTGATTGGCCTTTCACCCCCAGCCACAAGTCATCCGCTAATTTTTCAA 637 Query 229 CCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGA 288 | | ||| |||||||||||||| || |||||| ||||||||||||||||| |||| Sbjct 636 CATTAGTCGGTTCGGTCCTCCAGTTAGTGTTACCCAACCTTCAACCTGCCCATGGCTAGA 577 Query 289 TCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCT 348 |||| | ||||||||| | | ||| ||| | |||||| || |||||| |||| || Sbjct 576 TCACCGGGTTTCGGGTCTATACCCTGCAACTTA-ACGCCCAGTTAAGACTCGGTTTCCCT 518 Query 349 ACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCA 408 ||||| ||| | || ||||||||| || ||| || || |||| | | |||| | || Sbjct 517 GCGGCTCCCCTATAC-GGTTAACCTTGCTACAGAA-TATAAGTCGCTGACCCATTATACA 460 Query 409 AAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACA 468 ||||| |||| ||||| || | ||| | ||||| || | ||||| | ||| Sbjct 459 AAAGGTACGCAGTCAC------CCAACAAG-----TGGGCTCCCACTGCTTGTACGTACA 411 Query 469 TGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTA 527 |||||||||| || ||||||||||| | | ||||| |||||| |||||||||||||||| Sbjct 410 CGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 351 Query 528 CTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCA 587 || || | |||||||||| |||||||||||| ||| || ||||||| ||| ||||| Sbjct 350 CTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCA 291 Query 588 CAC 590 || Sbjct 290 GAC 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1806109569024