Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq89201 219 1e-54 >seq89201 Length=1645 Score = 219 bits (242), Expect = 1e-54 Identities = 298/409 (73%), Gaps = 15/409 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| |||||||||| | | || ||| | Sbjct 1268 CGACTACGCCTTTCGGCCTCGCCTTAGGGGTCGACTCACCCTGCCCCGATTAACGTTGGA 1209 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 | ||||||||||| ||||| |||| || |||||| | || |||| ||| | Sbjct 1208 CAGGAACCCTTGGTCTTCCGGCGTGCGGGCTTTTCACCCGCATTATCGTTACTTATGTCA 1149 Query 120 GCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACAC 177 |||||| |||| | || | ||||| || || |||| || |||| | || ||| Sbjct 1148 GCATTCGCACTTCTGAT-ACCTCCAGCAAACC-TCACAGTTCACCTTCGCAGGCTTACAG 1091 Query 178 GACGCTCCCCTACCCAAC--------CACACAGGTTGCCACAGCTTCGGCGGATAACTTA 229 |||||||||||||||| |||||| |||| ||||||||| | ||| || Sbjct 1090 AACGCTCCCCTACCCAATATGTTATTCACACAC--TGCCGCAGCTTCGGTGCATAGTTTT 1033 Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCA 289 ||||||| ||||| || |||| | ||| ||| ||||||||||||||| ||||| | Sbjct 1032 AGCCCCGTTACATCTTCCGCGCAGGCCGACTCGACTAGTGAGCTATTACGCTTTCTTTAA 973 Query 290 AGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCAC 349 | |||||||||||| |||||||| |||||| ||||| || ||||||| |||||||| Sbjct 972 ATGATGGCTGCTTCTAAGCCAACATCCTGGCTGTCTGAGCCTTCCCACATCGTTTCCCAC 913 Query 350 TGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | | || |||| ||| ||||||||| | |||||| ||||||||||| Sbjct 912 TTAACCATGACTTTGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1170155495424