Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq89201 389 1e-105 >seq89201 Length=1645 Score = 389 bits (430), Expect = 1e-105 Identities = 380/483 (79%), Gaps = 9/483 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACA-GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| ||||| | || || |||| ||||||||||||| |||||||| |||| Sbjct 526 CGAGTCTTAACTGGGCGTTAAGTTGCAGGGTATAGACCCGAAACCCGGTGATCTAGCCAT 585 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| ||||||| |||||||| ||||||| ||||||| |||||||||||||||| Sbjct 586 GGGCAGGTTGAAGGTTGGGTAACACTAACTGGAGGACCGAACCGACTAATGTTGAAAAAT 645 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||| |||||| ||||| | |||||||||||| || ||||| ||| ||||||||||||| Sbjct 646 TAGCGGATGACTTGTGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTC 705 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTA-TCACCATCGGGGGTAGAGCACTGTTATG 239 |||||| |||||||||||| ||||| | | ||| | ||||||||||||||||||| | Sbjct 706 CCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTTCGGGGGTAGAGCACTGTTTCG 765 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299 ||||||||| ||| || |||||||| || |||||||||||||| | | | | ||| Sbjct 766 GCTAGGGGGCCATCCCGGCTTACCAACCCGATGCAAACTCCGAATACCGAAGAATGTTAT 825 Query 300 CGCGGGAG--TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | |||||| | ||| ||||||||| |||||| ||||| || || || ||| Sbjct 826 CACGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGACC 883 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 ||||||||| ||| || | | | ||||| | ||||| || || ||| ||||| Sbjct 884 GCCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGA--AACGATGTGGGAAGGCTCAGACA 941 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 || ||||||||||||| |||||||||| ||||||||||| |||||| |||||||||||| Sbjct 942 GCCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACTAGTC 1000 Query 478 GAG 480 ||| Sbjct 1001 GAG 1003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1678918754304