Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq36366 123 2e-23
seq227148 107 2e-18
>seq36366
Length=4232
Score = 123 bits (136), Expect = 2e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455
|| || ||||| || ||||| ||||| || ||| ||| || || ||||| || |
Sbjct 2578 TTATTTAATGCAATTGAGACTCTACCGTGTGTAAAGAAGAAGGCAGACTGGGCATTACAG 2519
Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515
|||||| ||| | || ||||||||||| ||||| | | || ||||||| || ||
Sbjct 2518 TGGATCGGCAGCAAGACTGCTACATTTGGAGAACGTATTATTGCTTTTGCGGCAGTTGAA 2459
Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575
|| |||||||| || ||||| |||| ||||||||||| |||||||| || |||
Sbjct 2458 GGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGTGGTCTGATG 2399
Query 61576 CCCGGTCTGACCTTCAGCAATGA 61598
||||| |||| |||||||||||
Sbjct 2398 CCCGGATTGACTTTCAGCAATGA 2376
>seq227148
Length=2115
Score = 107 bits (118), Expect = 2e-18
Identities = 877/1419 (62%), Gaps = 46/1419 (3%)
Strand=Plus/Minus
Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521
|| || || || || | ||||||||| ||||||||||| || |||||||| ||||||||
Sbjct 1440 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAG 1381
Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGA 65581
||||| ||||| || || | ||||| || || ||||| |||| || | || ||||
Sbjct 1380 GCAGTCGGCATAGGGGCTATCAACAGAGAATTGCGCAAACCGTGTTTTCCTATCTTGTCT 1321
Query 65582 CGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGT 65641
| | |||||| ||| | ||| | | | || | | ||||||||| |
Sbjct 1320 TTGAGGGCAGCCCAGTCCCAAA--GGTCTGTAG--GAGTT--TTGTCCCACATATCATAC 1267
Query 65642 TGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTG 65701
|| ||| | || || || || || | | | ||| || || | |
Sbjct 1266 TGTAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGTGCCTTCTTTTTCT 1207
Query 65702 GCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTA 65761
|| | || ||| || | || | ||| || ||||||| || || || || || ||||
Sbjct 1206 GCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTG 1147
Query 65762 AGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGA 65821
|| | ||| | || || ||||| || || | ||||| ||||| | || ||||
Sbjct 1146 AGATGTATTGCTTTTTCACTTTCGTAAGGTATTCTCATCAACACAAACGCATCTGCCATG 1087
Query 65822 CCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACA 65881
|| ||||| |||||||| || || | || | || ||| ||| | | || ||||| |||
Sbjct 1086 CCCTGAACACCAATACCAATAGGTCTGTGTCTCATATTTGAAGTTTTTGCTTCAGGGACA 1027
Query 65882 GGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGT 65941
|| || | || | ||| || | || ||||| | || || | | ||| |
Sbjct 1026 GGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCT 967
Query 65942 CGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTG 66001
|| | || |||| ||| ||| | |||||| ||
Sbjct 966 TTTAACTTTTTAAAATTAAATCTCTTA------------------TTTTCAACAAACATG 925
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
||| || | || || ||||| || || || | || || | || || | |||
Sbjct 924 TTAAGTGCTATGGAAGCAAGGTTACAAACTGCCACTTCTTCTTCTGAAGTGTATTGCACA 865
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
| || ||||| ||||| || || || ||||| | ||| | |||||||||||| |
Sbjct 864 ACCTCAGTGCAAAGATTGCTACATTTAATTGTGCCAAGATTTTTTTGATTACTCTTCCTG 805
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
|| || |||||||| || | |||||| || || || ||||| ||||||| || || ||
Sbjct 804 TTACAAGCATCCTTATATAACATGTATGGTGTACCAGTCTCTACTTGGGCTTCTATAATT 745
Query 66182 GCGTGCCAAA------GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCG 66235
| | ||| | |||| || | ||| || | || | | |||
Sbjct 744 GACTTCCATAACTCTTGAGCTCG-GACTT-GTTTTATAAATCG-------TGTTTCTTCT 694
Query 66236 TAATGTTCG---TAGAGGTGTTCGAAGGATTCACCCCATA--CTTCGGACAGACATGGAC 66290
| || || | || || | |||||| | | | ||||| || | || | ||||
Sbjct 693 TCATATTTGGTATATAGTTCTTCGAA--TTCCTCTCCATAACAGTCAGCGAGGCCGGGAC 636
Query 66291 ACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGAT 66350
| | || |||||||| || |||| | |||| | |||||| | |||||| ||||
Sbjct 635 AATCATGAGGACACATGAGACTCCAAACGTCATCATTTTCTACTCTTTTCATAAACAGAT 576
Query 66351 CAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTT 66410
|||| ||||| | || || || || || | |||| || || | || ||| |
Sbjct 575 CAGGAATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTATTCT 516
Query 66411 TGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACG 66470
| || || | ||||||||| ||||| |||||||| || || | || || || || |
Sbjct 515 TCTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAATAAATTGCAAATG 456
Query 66471 AGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCA 66530
|| |||||| |||||||| || || || | || |||||| | || | ||
Sbjct 455 CACCAGGGCGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCA 396
Query 66531 ACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCC 66590
|||| || || || || || || |||||| ||||| | ||| || || | || |
Sbjct 395 ACATTGGCACTAGACCATTCGAGACGCCATTAGTGCCAGCTATGTAAGAACCCTGAGCTC 336
Query 66591 GTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGG 66650
|| || || | ||| || ||||| || | || || || ||||| |
Sbjct 335 TGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACACTGTT 276
Query 66651 CCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAAC 66710
| || || || || |||||| || | || || | | ||| |||| ||
Sbjct 275 TTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAGCAAGAGG 216
Query 66711 TAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAAT 66770
||| || || ||||| || || ||||| || || || | ||||| ||||| || |
Sbjct 215 AAAGCTGTGGCCGTGGTGTAGCTGCTGAGAACAGTGTAGGGCTTGCGTGTGTAAAATATT 156
Query 66771 GGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA 66830
||||| ||| || || | ||| || |||||||| ||| || ||||| || |
Sbjct 155 TCTCCGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACCGTGAATACCTA 96
Query 66831 GTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCA 66869
|| || ||| || | || |||||| | ||| ||||
Sbjct 95 TTGAGACTCTCATAAGCATGTGTTGAGGTCTTTCAACCA 57
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394504879696640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |