Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq242638 241 5e-61 seq227403 170 7e-40 >seq242638 Length=450 Score = 241 bits (266), Expect = 5e-61 Identities = 287/378 (76%), Gaps = 10/378 (3%) Strand=Plus/Minus Query 52 CGGCATTCGGAGTTTGGTT-GATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATCCAGTG 109 ||| ||||| |||||| | || || |||||| | | | |||||||| | | ||||| Sbjct 398 CGGTATTCGTAGTTTGCATCGAGTT-GGTAAGTCGGGATGACCCCCTAGTCGAAACAGTG 340 Query 110 CTCTACCTCCGG-GAAGAAA-CACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCA 167 ||||||| ||| || || |||| | |||| |||||||| ||||||||||||||| Sbjct 339 CTCTACCCCCGAAGATGAGTTCACGAGGCGCT--ACCTAAATAGCTTTCGGGGAGAACCA 282 Query 168 GCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCA 227 |||||| | |||||||||||||||| |||| | ||||| ||||||| || | |||||| Sbjct 281 GCTATCTCCCGGTTTGATTGGCCTTTCCCCCCCAGCCACAAGTCATCCGCTAATTTTTCA 222 Query 228 ACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAG 287 || | ||| |||||||||||||| || |||||| ||||||||||||||||| ||| Sbjct 221 ACATTAGTCGGTTCGGTCCTCCAGTTAGTGTTACCCAACCTTCAACCTGCCCATGGCTAG 162 Query 288 ATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGC 347 ||||| | ||||||||| | | ||| ||| |||||| || |||||| |||| | Sbjct 161 ATCACCGGGTTTCGGGTCTATACCTTGCAACT-TGACGCCCAGTTAAGACTCGGTTTCCC 103 Query 348 TACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTC 407 ||||||| ||| | | |||||||||||| ||| || || |||| | | |||| | | Sbjct 102 TACGGCTCCCCTATTC-GGTTAACCTCGCTACA-AAATATAAGTCGCTGACCCATTATAC 45 Query 408 AAAAGGCACGCCGTCACC 425 |||||| |||| |||||| Sbjct 44 AAAAGGTACGCAGTCACC 27 >seq227403 Length=434 Score = 170 bits (188), Expect = 7e-40 Identities = 160/204 (78%), Gaps = 15/204 (7%) Strand=Plus/Plus Query 388 AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAG 447 |||||| ||| ||||| | ||||||||||||||||||| || | | | Sbjct 23 AACTCGTAGGTTCATTATGCAAAAGGCACGCCGTCACC----------AATGAAG----G 68 Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACT 506 ||||||| | ||||| |||||||||||||||| |||||||||||||| | ||| ||| || Sbjct 69 CTCCGACCGCTTGTACGCACATGGTTTCAGGTTCTATTTCACTCCCCTCTCAGAGGTTCT 128 Query 507 TTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAA 566 |||| |||||||||||||||||| || | |||||||||| |||||||||||| ||| Sbjct 129 TTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGG 188 Query 567 CGGGTGGTCCCGCCAGATTCACAC 590 || ||||||| ||| ||||| || Sbjct 189 AGGATGGTCCCCCCATATTCAGAC 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1812940636928