Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq242638 260 3e-67 seq227403 259 1e-66 seq284 80.6 7e-13 >seq242638 Length=450 Score = 260 bits (288), Expect = 3e-67 Identities = 220/258 (85%), Gaps = 12/258 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||| ||| Sbjct 246 CCACAAGTCAT-CCGCTAA-TTTTTCAACATTAGTCGGTTCGGTCCTCCAGTTAGT-GTT 190 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||||||| |||||||||||| || |||||| || ||||| ||||||||| || || Sbjct 189 ACCCAACCTT-CAACCTGCCCAT-GGCTAGATCACCGGGTTT-CGGGTCTATA-CCTTGC 134 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTG 188 ||| ||||||| ||||||||| ||| | ||||| ||||||||||||||||| || | Sbjct 133 AACTTGACGCCCAGTTAAGACTCGGTTTCC-CTACGGCTCCCCTATTCGGTTAACCTC-G 76 Query 189 CCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGG 248 | || || ||||||||||||||||||||||||||||||||||||||||| || || Sbjct 75 CTACAAAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCTTAAA---GG 19 Query 249 GCTCCCACTGCTTGTACG 266 |||||||||||||||||| Sbjct 18 GCTCCCACTGCTTGTACG 1 >seq227403 Length=434 Score = 259 bits (286), Expect = 1e-66 Identities = 198/234 (85%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 186 TTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAG 245 |||||| ||| | ||| ||| | |||||| ||||||| |||| |||||| | || Sbjct 9 TTGCCAATGAGAGTAACTCGTAGGTTCATTATGCAAAAGGCACGCCGTCACCAATGAA-- 66 Query 246 TGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305 |||||| || ||||||||||| | ||||||||| ||||||||||||||||||| | || Sbjct 67 --GGCTCCGACCGCTTGTACGCACATGGTTTCAGGTTCTATTTCACTCCCCTCTCAGAGG 124 Query 306 TTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCC 365 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 125 TTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC 184 Query 366 TTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||||||||||||||||||||||| | || |||| ||| ||||||| Sbjct 185 TTGGAGGATGGTCCCCCCATATTCAGACAGGATGTCACGTGTCCCGCCCTACTC 238 >seq284 Length=9844 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 8624 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 8566 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| | ||| ||||||||||| || Sbjct 8565 ACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTTAGA 8525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1238417195648