Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq225805 221 4e-55 seq251017 168 2e-39 seq65264 134 5e-29 >seq225805 Length=807 Score = 221 bits (244), Expect = 4e-55 Identities = 220/283 (78%), Gaps = 9/283 (3%) Strand=Plus/Minus Query 282 AAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTAC 340 |||||||||| ||||| | |||||||||| |||| ||||||| | | ||||||| || Sbjct 793 AAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCAC 734 Query 341 TCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCG 400 | | ||||||||| | | || ||| |||||||| || || |||||||||||| Sbjct 733 AGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGCCATCATTACGCCATTCG 674 Query 401 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCAC 460 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 673 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGC 614 Query 461 CGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCC 520 ||||||||||||||||||| || | || || | | || ||| || | Sbjct 613 CGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGC------CTTG--CGGCTGACCCCATC 562 Query 521 TCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||||||||||||||||||||| |||||||| || Sbjct 561 AATTAACCTTCCAGCACCGGGCAGGCGTCACACCGTATACGTC 519 >seq251017 Length=274 Score = 168 bits (186), Expect = 2e-39 Identities = 116/130 (89%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||| ||||| |||||||||||||||||||||||| |||||||| | ||||| || Sbjct 129 TCGAGTTGTAGCTCTCGCAGTCAAGCTCCCTTGTGCCTTTACACTCTGCGAATGATTTCC 70 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 69 AACCATTCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGA-GGCAACCGCCCCAG 11 Query 121 TTAAACTACC 130 |||||||||| Sbjct 10 TTAAACTACC 1 >seq65264 Length=308 Score = 134 bits (148), Expect = 5e-29 Identities = 156/209 (75%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 219 ACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAAT 278 ||| |||| | || || || |||| ||||||||| ||| | || || |||| Sbjct 100 ACTGGCGTCCCGGCGTCTAAGGCTCCTACCTATCCTGTACATGTGGTACAGACACTCAAT 159 Query 279 ACCAAGCTATAGTGAAGGTCCC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTT 337 | ||| || ||| ||| ||| ||||||||| ||||||| |||| | ||| ||||||| Sbjct 160 ATCAAACTGCAGTAAAGCTCCATGGGGTCTTTCCGTCCTGTCGCGGGTAACCTGCATCTT 219 Query 338 TACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCAT 397 || ||||| |||||||||| | || | |||||||||| | |||||||||| | Sbjct 220 CACAGGTACTAAAATTTCACCGAGTCTCTCGTTGAGACAGTGCCCAAATCGTTACGCCTT 279 Query 398 TCGTGCAGGTCGGAACTTACCCGACAAGG 426 |||||| |||||||||||||||||||||| Sbjct 280 TCGTGCGGGTCGGAACTTACCCGACAAGG 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1698035948672