Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq91 140 1e-30 >seq91 Length=1004369 Score = 140 bits (154), Expect = 1e-30 Identities = 116/142 (82%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| ||| ||||| ||||||| Sbjct 954521 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGNGGTAAACTTCCTCTAAGGCTAAAT 954580 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 954581 ATTACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 954640 Query 160 AGAGAGTTAAAAAGCACGTGAA 181 |||||||| || || ||||||| Sbjct 954641 AGAGAGTTCAAGAGTACGTGAA 954662 Score = 134 bits (148), Expect = 6e-29 Identities = 107/129 (83%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||| | |||||||||||||||||||||||||||||| ||| ||||| ||| | Sbjct 955288 GAGCATACACGCTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTTGAAGTCAGGG 955347 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| || |||||| || |||| ||||| ||||||||||||||||| | |||||| Sbjct 955348 GAAACCATGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCTGAACTGGGTA 955407 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 955408 TAGGGGCGA 955416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079978614350