Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq91 453 4e-125 seq280 134 5e-29 seq687 127 7e-27 >seq91 Length=1004369 Score = 453 bits (502), Expect = 4e-125 Identities = 322/366 (88%), Gaps = 5/366 (1%) Strand=Plus/Minus Query 173 TTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTG--CGC 228 ||||||| || || | ||||| |||| | | |||||||| ||||| | | ||| Sbjct 957196 TTCCGCTCAATCGAGTTAGTAATGAAACAACGAAAGTAGTGGTTTTTCAGCGTCGATCGC 957137 Query 229 CGAAACGG-CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGT 287 ||||| ||||||||||| |||||||| ||| ||| | ||| | | ||||||||| Sbjct 957136 ATAAACGATCTCCCACTTATGCTACACCTTTCATGTCTCCTTACAGTGCCAGACTAGAGT 957077 Query 288 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGG 347 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 957076 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTTCCAAGCCCGTTCCCTTGGCTGTGG 957017 Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 957016 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 956957 Query 408 AATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 956956 AATTAGATGACGAGGCATTTGGCTACCTTTGAAGAGTCATAGTTACTCTTGCCGTTTACC 956897 Query 468 CGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 527 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 956896 CGCGCTTGCTTGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 956837 Query 528 TCAACA 533 |||||| Sbjct 956836 TCAACA 956831 Score = 104 bits (114), Expect = 8e-20 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || ||| ||||| ||| |||| |||||||||||||||||||| Sbjct 957415 CTTTTGCTCCACGCGAGGTTTCTAACCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 957356 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| ||||||||||||||| || ||| || | |||||| Sbjct 957355 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCACCTGGCAGTGTTCTCGAATCGGATC 957296 >seq280 Length=308614 Score = 134 bits (148), Expect = 5e-29 Identities = 74/74 (100%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21974 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 22033 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 22034 GAGGCATTTGGCTA 22047 >seq687 Length=50644 Score = 127 bits (140), Expect = 7e-27 Identities = 76/80 (95%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 5722 AGTAGATAGGGAGAGTGGGAATCTCGTGAATCCATTCATGCGCGTCACTAATTAGATGAC 5663 Query 419 GAGGCATTTGGCTACCTTAA 438 |||||||||||||| |||| Sbjct 5662 GAGGCATTTGGCTATTTTAA 5643 Score = 116 bits (128), Expect = 1e-23 Identities = 67/69 (97%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 48877 TTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 48936 Query 364 ATAGGGACA 372 ||||||||| Sbjct 48937 ATAGGGACA 48945 Score = 87.8 bits (96), Expect = 6e-15 Identities = 50/51 (98%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 36260 TTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 36310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635183697056