Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq33 257 1e-63 seq416 167 2e-36 >seq33 Length=1899332 Score = 257 bits (284), Expect = 1e-63 Identities = 1144/1797 (64%), Gaps = 41/1797 (2%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||||||||| ||||| || || | ||| || | | ||||||||| || || Sbjct 686940 TCAACAGTGAACTGGATAGCATTTGCGGCTGGCTTCGTGCGTAAATAGTACATTCCCGTT 686881 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | ||| ||| ||||||||||| || |||| ||||| ||||||| || || Sbjct 686880 TTTAAGCCCATTTTCCACGCATAGAAATGAATAGATGTCAATTTACCATAATTTGGTTCA 686821 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 || ||||| ||||| || || || |||||||| || | || | || |||||||| Sbjct 686820 GCAACATGAATATTGAAGGATTGGCTCTGATCAATAAATGCCCCTCTGTCAGCAGCCATT 686761 Query 65258 TCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATT 65317 | || | | | || | |||||||| || || || | | | || || | Sbjct 686760 TGTATTGTTGTTTTTACAGACACTTCCCAGACAGTTTTATATAAGTCCCTTATATCTTTA 686701 Query 65318 GGAATCTCCTCAATGTCCTGGACTGAACCACGA-CGTGCAATAATGCGATTACGCATCGA 65376 ||||| | ||||| | || | || ||| | ||| || || |||| ||| Sbjct 686700 GGAATTGCTTCAATATTTTGAATAGATCCATTATTGTG-GATGATAAGATTTTTCATATC 686642 Query 65377 CTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAA 65436 || ||| ||| | || | | || | | | ||| ||| |||| | |||||||| Sbjct 686641 TTCATCCCATAAATCAGCTTCAGTTAAATCTCGTAACAAATGATGATTAACAACTTGGAA 686582 Query 65437 CTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGT 65496 || || |||| || || | ||| |||||||| || | |||||||| |||||| | Sbjct 686581 TTCACCTGACAAGACTCGTCTCTGATAAATGTTGGAAGTAAATGGTTCAAATGATTCATT 686522 Query 65497 GTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCG 65556 || || | ||||| ||||| |||||||||||||| ||||| | || | || |||| Sbjct 686521 ATTTCCCAATATTTGAGCAGTGGATGCAGTTGGCATTGGAGCTAATAATAGGGAATTTCT 686462 Query 65557 CAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTC 65616 | || | | |||| || | | | |||| ||||||| || | | | Sbjct 686461 AAGACCATGTTTGGCAATTTTTTCTTTGAGTGACACCCAATTCCACA--AGTCTGTGGGG 686404 Query 65617 GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAA 65676 | | ||||||||| | ||||| | || |||||| || | || | Sbjct 686403 GTTTT----ATTCCACATATCATATTGCAATATACCTTGACTGGCAGGACAGCCTTCATA 686348 Query 65677 ACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATA 65736 | | || || || || | || || || | | ||| |||| || ||||| || |||| Sbjct 686347 AGTCTCATAGACGCCATACTTCTCAGCTAACTCACAACTGGCTTCTAGTGCCCCATAATA 686288 Query 65737 AATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACC 65796 ||| || || || || || |||| | || | ||| | || || ||||| || |||| Sbjct 686287 AATTGTTTCAAATATTTGTTGATTTAATTTAATTGCTGCCTCACTTTCGTAAGGTATACG 686228 Query 65797 CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAA 65856 ||| | ||||| | || || | ||||| |||||||| |||||||| || || | || Sbjct 686227 CATTAAAACAAATGCATCAGCTAATCCTTGGACTCCAATTCCGATGGGTCGGTGCCTCAT 686168 Query 65857 ATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATT 65916 ||| || | | ||||| || || || || ||||| | ||| ||||| ||| | ||| Sbjct 686167 ATTTGAGTTTTTTGCCTCTGGCACTGGATAATAATTTACATCAATAATTTTATTTAGATT 686108 Query 65917 GCGTGTCA---CCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACG 65973 | || | | | || | | | | ||| | ||||| | |||||| | Sbjct 686107 CTGAGTTATAGTCTTAGTAAC--TTCCTTTAATTTGGT-GAAAT-TATATGTTTTG---- 686056 Query 65974 ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGC 66033 || | | ||||||| | | |||| ||||| || ||||| ||||| Sbjct 686055 -TCCTCATT---------CACAAACATATTTAAAGCAATTGATGCTAGATTGCACACAGC 686006 Query 66034 TATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGT 66093 | || || | | ||| || || |||||||| ||||||| || ||||| || || Sbjct 686005 CACTTCATCTGATGAGGTGTATTCTACAATTTCAGTGCACAAGTTGCTGCATTTAATAGT 685946 Query 66094 GCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGT 66153 ||||| |||| ||| || || || | |||||||| ||| || || | |||||| ||||| Sbjct 685945 ACCCAAGTTCTTTTGGTTGCTTTTTCTATTGCATGAATCTTTATAAAGCATGTATGGAGT 685886 Query 66154 GCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC-CGT-- 66210 || || |||||||| | || || || || | ||||||| | | || |||| || Sbjct 685885 TCCTGTTTCAACTTGTGCTTCGATAATAGCTTTCCAAAGAACTTGAGCTCTCACTTGTTT 685826 Query 66211 -ACGTACCG-CCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268 ||| | || |||| |||| ||| || | || || | ||| || |||||| Sbjct 685825 CACGAAGCGACCCT--CTTT---TTCATATTTCTCATACAAAGCTTCAAATTCCTCACCC 685771 Query 66269 CATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328 || || | || | ||||| | || || ||||| | |||||| || | Sbjct 685770 CAACAGTCTGCTAGTCCAGGACATTCATGGGGGCACATGATACTCCAATCTTGATTGCTT 685711 Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 ||||| | ||| || | ||||||||||| | || ||||| || || | || || Sbjct 685710 TCTACTCTTTTCATGAACAAGTCAGGTATCCATAAAGCATAGAATAGCTCTCTGGCACGG 685651 Query 66389 TGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 || || | || ||| || || ||| || ||||| ||||| || || |||||||| Sbjct 685650 ACTTCTTCTTTCCCAGTG-TTCTTTTTCAAATCAAGGAATTCAAATATATCAGCATGCCA 685592 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 |||||| | ||| ||||| || | ||| | ||| || |||||||| || || || Sbjct 685591 TGGTTCTAAGTATATGGCAAATGCGCCGGGTCTTTTATTACCTCCTTGGTCTACATATCG 685532 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| |||||| | || | ||||| ||||| || || ||||| ||||| || || Sbjct 685531 AGCAGTGTTGTTGTACACTCTTAACATGGGTACTAGACCATTAGAGACACCATTTGTACC 685472 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 | || | ||| ||| | || ||| |||| ||||| || ||||| || | Sbjct 685471 AGCTATATAAGTTCCCTTTGCTCTAATGCAGTGTACATGAAGACCTATCCCACCAGCTGA 685412 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687 ||| || ||| ||||| | | || | || || |||||| ||| || | Sbjct 685411 CTTAGAAATGAGGGCACATTGTTTTAACGTGTCATAAATTCCCTCAATGCTATCATCCCT 685352 Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 || | | || |||||||| | ||| ||| || || || || ||||| || || Sbjct 685351 CATTGCTATAAGAAAGCATGAAGATAATTGTGGTCGTGGAGTTGCTGCTGAGAAAAGAGT 685292 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807 || | || || ||||| || | |||| |||||| || | || | | || Sbjct 685291 TGGACTTGCATGTGTAAAATATTTTTCTGACAGAAGATTGTAGGTGTTTATAGCCCCCTC 685232 Query 66808 AATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTC 66864 ||||| ||||||||| || || | | | |||||| || | | || |||| ||| Sbjct 685231 AATGTCTTCGCCATGTATTCCTATAGAAACTCGCATGAGCATATGCTGTGGCCTTTC 685175 >seq416 Length=155529 Score = 167 bits (184), Expect = 2e-36 Identities = 178/234 (76%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 61143 TTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || |||||| ||||||||| | | | | |||| ||| ||||| || Sbjct 138250 TTTGTTCAG-GACATGTCAGACTGGGAGAATCTCAAGGACAGTGAGAGACACTTCATCAA 138308 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||||| |||| |||||||| || || || || || || |||||||| ||| ||||||| Sbjct 138309 ACATGTGCTGGCTTTCTTTGCTGCGTCTGATGGCATTGTTAATGAGAACTTAGTGGAACG 138368 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | || |||||||||||| | || || | || ||||| || ||||||||||| || Sbjct 138369 CTTCTCTCAAGAGGTGCAAGTGACTGAAGCCAGATGCTTCTATGGATTCCAGATTGCTAT 138428 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 ||||||||| ||||| ||||||||| | | ||||| || || ||||| || || Sbjct 138429 GGAGAATGTTCACTCTGAGATGTACTCTTTGCTCATTGACACATACATTAGAGA 138482 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||||||||| || || || | || |||||| ||| || || |||||| | || | Sbjct 138696 TGTTCAATGCTATTGAAACCCTGCCCTGTGTGAAGAAGAAGGCTGACTGGGCCCTGAAGT 138755 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 |||| |||| | | || ||||||| ||| || | | || ||||| | || || | Sbjct 138756 GGATTGCCAGCAAGTCAGCCACATTTGCTGAGCGTATCATTGCCTTTGCTGCAGTTGAAG 138815 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 | |||| ||| ||| ||||| ||||||||||| ||||||| || ||| | |||| Sbjct 138816 GCATATTCTTCTCTGGCAGTTTTGCATCAATCTTTTGGATGAAGAAGCGCGGATTGATGC 138875 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 | || |||| |||||||||||| |||| || | || |||| Sbjct 138876 CTGGATTGACATTCAGCAATGAGCTGATTTCTAGAGATGAGG 138917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563169176080