Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_032907.1 Length=13109 Score E Sequences producing significant alignments: (Bits) Value seq260 114 1e-21 >seq260 Length=366442 Score = 114 bits (126), Expect = 1e-21 Identities = 283/425 (67%), Gaps = 7/425 (2%) Strand=Plus/Minus Query 10069 AAAAAAGGACCATATAAGCCATATCTAGGATCTCGGACCACTGAGAGCACATCCCTCTTA 10128 || || ||||| || ||| |||| || || ||| || | || || ||||| ||||| Sbjct 308390 AAGAAGGGACCTTACAAGGCATACCTCGGGTCTAAAACAAAGGAAAGTACATCTCTCTTG 308331 Query 10129 AGACCTTGGGAGAACGAGTCCAAAGTGCCCCTTATCAGACGGGCGGCTGAACTCAGGAAA 10188 | |||||||| || ||| ||| | || || |||||| | || || || || || || Sbjct 308330 CGGCCTTGGGAAAATGAGAGCAAGATCCCTCTCATCAGAAGAGCAGCGGACCTGAGAAAG 308271 Query 10189 GCCTTTAACTGGTTTGTCAACCCTGACTCTCATTTAGGGAGATCCATCTTAAACAATTTG 10248 || || ||||| | || | | || | ||||| |||||| || ||| || Sbjct 308270 GCATTCGGATGGTTCATTAATCAACATTCGAACTTAGGCCAATCCATATTGTCGAATCTG 308211 Query 10249 CACTCTCTT-ACAGGGGAAGTATGGATCGAAGAAGG--AGTTA-AGGCACAAAGATCTGG 10304 | | | | ||||| || |||| ||| | | || | || | |||||| || Sbjct 308210 TATGCCCCTCACAGGTGAGAGATGG---GAAAATGACCAGCCAGAGAAAGTAAGATCAGG 308154 Query 10305 ATCTGCACTCCACAGGTTTAGCTGCTCGAGACAAAGTCAAGGGGGATACATCGCCCAATC 10364 |||| | ||||| ||||| || || || | |||||||||||||| ||||| || || | Sbjct 308153 ATCTACCCTCCATAGGTTCAGTTGTTCACGGCAAAGTCAAGGGGGCTACATTGCTCAGGC 308094 Query 10365 TCCCTTTTGTGGTACATGGATGCTAGAGACTACGGACTCAATGCATGGTCTAGGAGAACA 10424 ||| | | ||| ||||||||| | ||||| || ||| ||||| | | ||| Sbjct 308093 TCCGCTGTTTGGGACATGGATGTTGGAGACCACCGACACAATGAGTCCGTTGGGATCCAT 308034 Query 10425 GAATTATGACTTCTTGTTCCAGGCACTTCTGTTATATGGACAAATAACTACTGGAGAGAT 10484 |||||||| ||||||| ||||| | |||| || | || || || |||||||| Sbjct 308033 CAATTATGATTTCTTGTATCAGGCCCAGTTGTTGTACAGCCAGATGACAGTGGGAGAGAT 307974 Query 10485 ACACA 10489 ||||| Sbjct 307973 ACACA 307969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41829917786992