Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq691 457 3e-126 seq2110 132 2e-28 seq1909 84.2 7e-14 >seq691 Length=103775 Score = 457 bits (506), Expect = 3e-126 Identities = 323/366 (88%), Gaps = 5/366 (1%) Strand=Plus/Minus Query 173 TTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTG--CGC 228 ||||||| || || | ||||| |||| || | |||||||| ||||| | | ||| Sbjct 98388 TTCCGCTCAATCGAGTTAGTAATGAAACAATGAAAGTAGTGGTTTTTCAGCGTCGATCGC 98329 Query 229 CGAAACGG-CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGT 287 ||||| ||||||||||| |||||||| ||| ||| | ||| | | ||||||||| Sbjct 98328 GCAAACGATCTCCCACTTATGCTACACCTTTCATGTCTCCTTACAGTGCCAGACTAGAGT 98269 Query 288 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGG 347 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 98268 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTTCCAAGCCCGTTCCCTTGGCTGTGG 98209 Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 98208 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 98149 Query 408 AATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 98148 AATTAGATGACGAGGCATTTGGCTACCTTTGAAGAGTCATAGTTACTCTTGCCGTTTACC 98089 Query 468 CGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 527 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 98088 CGCGCTTGCTTGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 98029 Query 528 TCAACA 533 |||||| Sbjct 98028 TCAACA 98023 Score = 100 bits (110), Expect = 9e-19 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || ||| ||||| ||| |||| |||||||||||||||||||| Sbjct 98607 CTTTTGCTCCACGCGAGGTTTCTAACCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 98548 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||| ||| ||||||||| ||||||||||||||| || ||| || | |||||| Sbjct 98547 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCAGTGTTCTCGAATCGGATC 98488 >seq2110 Length=13601 Score = 132 bits (146), Expect = 2e-28 Identities = 76/78 (97%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4273 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 4214 Query 421 GGCATTTGGCTACCTTAA 438 |||||||||||| |||| Sbjct 4213 GGCATTTGGCTATTTTAA 4196 >seq1909 Length=20469 Score = 84.2 bits (92), Expect = 7e-14 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 375 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 434 ||||| | ||| ||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct 20042 GGGAAATTTGTTGATCCATTCAAGCGCGTCACTAATTACATGACGAGGCATTTGGCTACC 20101 Query 435 T 435 | Sbjct 20102 T 20102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635151352800