Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19]
2,975 sequences; 341,147,348 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq691 457 3e-126
seq2110 132 2e-28
seq1909 84.2 7e-14
>seq691
Length=103775
Score = 457 bits (506), Expect = 3e-126
Identities = 323/366 (88%), Gaps = 5/366 (1%)
Strand=Plus/Minus
Query 173 TTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTG--CGC 228
||||||| || || | ||||| |||| || | |||||||| ||||| | | |||
Sbjct 98388 TTCCGCTCAATCGAGTTAGTAATGAAACAATGAAAGTAGTGGTTTTTCAGCGTCGATCGC 98329
Query 229 CGAAACGG-CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGT 287
||||| ||||||||||| |||||||| ||| ||| | ||| | | |||||||||
Sbjct 98328 GCAAACGATCTCCCACTTATGCTACACCTTTCATGTCTCCTTACAGTGCCAGACTAGAGT 98269
Query 288 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGG 347
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 98268 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTTCCAAGCCCGTTCCCTTGGCTGTGG 98209
Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 98208 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 98149
Query 408 AATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467
||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 98148 AATTAGATGACGAGGCATTTGGCTACCTTTGAAGAGTCATAGTTACTCTTGCCGTTTACC 98089
Query 468 CGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 527
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 98088 CGCGCTTGCTTGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 98029
Query 528 TCAACA 533
||||||
Sbjct 98028 TCAACA 98023
Score = 100 bits (110), Expect = 9e-19
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| || ||| ||||| ||| |||| ||||||||||||||||||||
Sbjct 98607 CTTTTGCTCCACGCGAGGTTTCTAACCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 98548
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||| ||| ||||||||| ||||||||||||||| || ||| || | ||||||
Sbjct 98547 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCAGTGTTCTCGAATCGGATC 98488
>seq2110
Length=13601
Score = 132 bits (146), Expect = 2e-28
Identities = 76/78 (97%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4273 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 4214
Query 421 GGCATTTGGCTACCTTAA 438
|||||||||||| ||||
Sbjct 4213 GGCATTTGGCTATTTTAA 4196
>seq1909
Length=20469
Score = 84.2 bits (92), Expect = 7e-14
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 375 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 434
||||| | ||| ||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 20042 GGGAAATTTGTTGATCCATTCAAGCGCGTCACTAATTACATGACGAGGCATTTGGCTACC 20101
Query 435 T 435
|
Sbjct 20102 T 20102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635151352800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |