Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_032907.1 Length=13109 Score E Sequences producing significant alignments: (Bits) Value seq1648 116 3e-22 >seq1648 Length=31512 Score = 116 bits (128), Expect = 3e-22 Identities = 282/424 (67%), Gaps = 6/424 (1%) Strand=Plus/Plus Query 10069 AAAAAAGGACCATATAAGCCATATCTAGGATCTCGGACCACTGAGAGCACATCCCTCTTA 10128 || || ||||| || ||| |||| || || ||| || | || || ||||| ||||| Sbjct 19655 AAGAAGGGACCTTACAAGGCATACCTCGGGTCTAAAACAAAGGAAAGTACATCTCTCTTG 19714 Query 10129 AGACCTTGGGAGAACGAGTCCAAAGTGCCCCTTATCAGACGGGCGGCTGAACTCAGGAAA 10188 | |||||||| || ||| ||| | || || |||||| | || || || || || || Sbjct 19715 CGGCCTTGGGAAAATGAGAGCAAGATCCCTCTCATCAGAAGAGCAGCGGACCTGAGAAAG 19774 Query 10189 GCCTTTAACTGGTTTGTCAACCCTGACTCTCATTTAGGGAGATCCATCTTAAACAATTTG 10248 || || ||||| | || | | || | ||||| |||||| || ||| || Sbjct 19775 GCATTCGGATGGTTCATTAATCAACATTCGAACTTAGGCCAATCCATATTGTCGAATCTG 19834 Query 10249 CACTCTCTTACAGGGGAAGTATGGATCGAAGAAGG--AGTTA-AGGCACAAAGATCTGGA 10305 | | || ||||| || |||| ||||| | || | || | |||||| ||| Sbjct 19835 TATGCCCTCACAGGTGAGAGATGG---GAAGATGACCAGCCAGAGAAAGTAAGATCAGGA 19891 Query 10306 TCTGCACTCCACAGGTTTAGCTGCTCGAGACAAAGTCAAGGGGGATACATCGCCCAATCT 10365 ||| | ||||| ||||| || || || | |||||||||||||| ||||| || || || Sbjct 19892 TCTACCCTCCATAGGTTCAGTTGTTCACGGCAAAGTCAAGGGGGCTACATTGCTCAGGCT 19951 Query 10366 CCCTTTTGTGGTACATGGATGCTAGAGACTACGGACTCAATGCATGGTCTAGGAGAACAG 10425 || | | ||| ||||||||| | ||||| || ||| ||||| | | ||| Sbjct 19952 CCGCTGTTTGGGACATGGATGTTGGAGACCACCGACACAATGAGTCCGTTGGGATCCATC 20011 Query 10426 AATTATGACTTCTTGTTCCAGGCACTTCTGTTATATGGACAAATAACTACTGGAGAGATA 10485 |||||||| ||||||| ||||| | ||| || | | || || ||||||||| Sbjct 20012 AATTATGATTTCTTGTATCAGGCCCAGTCGTTGTACAGCTAGATGACAGTGGGAGAGATA 20071 Query 10486 CACA 10489 |||| Sbjct 20072 CACA 20075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41828961099600