Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq105375 237 2e-60 >seq105375 Length=2155 Score = 237 bits (262), Expect = 2e-60 Identities = 187/220 (85%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| | Sbjct 337 GTACAAAGGGCAGGGACGTAGTCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 280 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||| | || ||||||| ||||| || ||||| ||| || Sbjct 279 CTCGTTGAAGAGCAAAAATTACAAAGCTCCATCCCCAGCACGACAAAGTTTCACAAGTTT 220 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | | |||| ||||| | |||||||| | |||||||||||||||||| Sbjct 219 ACCCAGTCATTTCGGACAAGGGGCCCCACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCA 160 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 |||| ||||||||||||||||||||||||||||||||||| Sbjct 159 GCCCGGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751028953210