Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq12543 77.0 5e-12 >seq12543 Length=1202 Score = 77.0 bits (84), Expect = 5e-12 Identities = 108/152 (71%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 58 CCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGG 117 |||||||| || || ||||| | || || ||||| |||||||||| || || || || Sbjct 979 CCCGGTGCTGGTGCCTCTTCAACCACTTTTTGGTGGCGACGTTGCATTGAACAGTCACGT 1038 Query 118 TCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGT 177 || | | || | || ||||| ||||| || | || ||||| | ||| | |||||| Sbjct 1039 TCTGCTAAGTAAACTGCATGGCCTTGGCCATCAGCCATAACTTGGATTTCAATATGACGT 1098 Query 178 GGGTTGGTCAGGTACTTTTCCAGGTAGACCAT 209 ||||| ||| | ||||||| || ||||| Sbjct 1099 GGGTTTTCAAGGAATTTTTCCATATAAACCAT 1130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735049613780