Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq33826 111 3e-22 >seq33826 Length=5448 Score = 111 bits (122), Expect = 3e-22 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 131 CAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCG 190 |||||| ||| |||| |||| |||| | |||||| | | |||| | || | Sbjct 2269 CAGTTTTAAAAGCAGTTCCAAGGTTAAGCCTCGGGATTTCACTTTTAACTTACTAACCAG 2328 Query 191 CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCG 250 ||||| ||| |||||| |||||||| |||| |||||||| ||| || |||||||||||| Sbjct 2329 CCTACGCGCTCTTTACGCCCAATAATTCCGAATAACGCTAGCCCTCTCCGTATTACCGCG 2388 Query 251 GCTGCTGGCACGTAGTTAGCC 271 |||||||||||| |||||||| Sbjct 2389 GCTGCTGGCACGGAGTTAGCC 2409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 827729782474