Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq33826 111 5e-22 >seq33826 Length=5448 Score = 111 bits (122), Expect = 5e-22 Identities = 79/88 (90%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 405 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTAC 464 |||||||| |||||||||||||||||||||||| || ||||||||||||| |||||||| Sbjct 2409 GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTATTCGGAATTA- 2351 Query 465 TGGGGCGTAAAGGGTGCGTAGG-TGGTT 491 | |||||||||| | ||||||| ||||| Sbjct 2350 TTGGGCGTAAAGAGCGCGTAGGCTGGTT 2323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1495603789056