Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq33826 143 6e-32 >seq33826 Length=5448 Score = 143 bits (158), Expect = 6e-32 Identities = 117/142 (82%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 20 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTAC 79 |||||||| |||||||||||||||||||||||| || ||||||||||||| |||||||| Sbjct 2409 GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTATTCGGAATTAT 2350 Query 80 TGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACC 139 ||||||||||| | ||||||| | || ||||| | | |||||| | |||| |||| Sbjct 2349 TGGGCGTAAAGAGCGCGTAGGCTGGTTAGTAAGTTAAAAGTGAAATCCCGAGGCTTAACC 2290 Query 140 CCGGGACTGCTTTTGAAACTGC 161 || ||||||||| ||||||| Sbjct 2289 TTGGAACTGCTTTTAAAACTGC 2268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201596206592