Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq126574 179 7e-43 >seq126574 Length=1650 Score = 179 bits (198), Expect = 7e-43 Identities = 201/263 (76%), Gaps = 12/263 (5%) Strand=Plus/Minus Query 66 CGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC--CT 123 ||||||| |||| || |||||||||| |||| |||||||||| |||||| || | Sbjct 346 CGGGGAGCTGGCAATCAAGCTTTGATCCGGAGATGTCCGAATGGGAAAACCCAGCTAGCA 287 Query 124 TTGGGTCATTGC----ATGCTGAATACATAGG-TATGCAAAGCGAACGCGGCGAACTGAA 178 | | | || | || ||||||||||||| || | | ||||||| || |||||||| Sbjct 286 TAAGCTAGTTACTCTTAT-CTGAATACATAGGATAAGTAGAGCGAACCTGGAGAACTGAA 228 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 227 ACATCTAAGTAACCAGAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 168 Query 239 ATGGGATGAGCCTTTACGAGATAGTTGAATTG--ATAGTGGAATCCTCTGGAAATAGGAG 296 |||||| ||||| || | |||| | |||| |||| |||| || || || Sbjct 167 ATGGGAGGAGCCGATATGTGATAACT--ATTGCAATAGAAGAATGGCATGACAAGGCCAG 110 Query 297 CCATAGCGGGTGATAGCCCCGTA 319 || ||| |||||| ||||||||| Sbjct 109 CCGTAGAGGGTGACAGCCCCGTA 87 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917175827904