Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_023503.1
Length=48800
Score E
Sequences producing significant alignments: (Bits) Value
seq45851 89.7 2e-13
>seq45851
Length=25406
Score = 89.7 bits (98), Expect = 2e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 2773 GTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACT 2832
|||||||| || || ||||||||||||||| | || |||||| | | |||| | |
Sbjct 8283 GTATCACATCGATCTGGTGAAACTGAAGATACTTTTATTGCTGATTTGGTTGTTGGACTT 8224
Query 2833 AACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACAAC 2892
| |||||||||||||||| ||| || | ||| |||| ||| | |||||||| ||
Sbjct 8223 AGTACTGGTCAAATTAAGACTGGTGCACCATGCCGTTCTGAACGTTTGGCTAAATATAAT 8164
Query 2893 CAATTGCTTCGTATCGAAGACCAACTTGG 2921
||| | | ||||| ||||| || ||||
Sbjct 8163 CAAATTTTACGTATTGAAGAAGAAATTGG 8135
Score = 82.4 bits (90), Expect = 2e-11
Identities = 134/190 (71%), Gaps = 11/190 (6%)
Strand=Plus/Minus
Query 1693 GCACGTGAAGTCCTTGACTCACGCGGTAACCCAACACTTGAAGTAGAAGTTTA--CACTG 1750
|| ||| || || |||| || || ||||| |||||| ||||||| || |||| |||||
Sbjct 9369 GCTCGTCAAATCTTTGATTCTCGTGGTAATCCAACAGTTGAAGTTGA--TTTAACCACTG 9312
Query 1751 AATCTGGTGCATTC--GGTCGCGGTATGGTTCCTTCAGGAGCATCAACTGGTGAACACGA 1808
||| ||| ||| || || ||| || || |||||||||||||||| ||| ||
Sbjct 9311 AATTAGGTTTGTTCAGGGCTGCTGTA-----CCATCTGGAGCATCAACTGGTGTACATGA 9257
Query 1809 AGCAGTAGAACTTCGTGATGGTGACAAAGCTCGTTACGGTGGTCTTGGTACTCAAAAAGC 1868
||| | ||| | |||||| ||| ||| ||| |||| ||| | |||||||
Sbjct 9256 GGCACTTGAATTGCGTGATAATGAAAAAAACAATTATCATGGTAAAGGTGTTAAAAAAGC 9197
Query 1869 AGTTGATAAC 1878
||||||| ||
Sbjct 9196 AGTTGATCAC 9187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 155791412082936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |