Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_031918.1
Length=45342
Score E
Sequences producing significant alignments: (Bits) Value
seq30817 136 1e-27
>seq30817
Length=4284
Score = 136 bits (150), Expect = 1e-27
Identities = 194/273 (71%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 33660 CCATTTTCTAGTGCGCAACTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTC 33719
|||||| | || | ||| |||||| | ||| |||||||||||||| | || || ||
Sbjct 296 CCATTTACGTGTTTGTAACGAACCTTCGATATAGACTTGTGAGCCTTTTTTCAGGTATTC 237
Query 33720 ACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTT 33779
|| |||| |||||| | ||||| || ||||| || ||||||||||| |||| ||
Sbjct 236 CCCTGCAACTTCAGCTAATTTGCCGAAAATAACCACACGGTGCCATTCGGTTTTTTCACG 177
Query 33780 TTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAAC 33839
||||||| || ||| ||| ||| ||| || || || | || | ||| || ||
Sbjct 176 CATCTCACCGGTTTGCTTGTCACGCCAACTTTCAGAAGTTGCCAGAGTCAGGTTTGCCAC 117
Query 33840 AGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGAT 33899
|| ||||| || ||||| || || | ||| || || || |||| | |||| | ||
Sbjct 116 CGCTCCGCCGTTAGGCATATAACGGATTTCAGGATCTTGCCCTAGGTTACCGATAAGAAT 57
Query 33900 TACTTTATTTACGCCGCGAGTTGCCATTTATTA 33932
||||||||||||||| | | |||||||||||
Sbjct 56 TACTTTATTTACGCCTCTGCTGGCCATTTATTA 24
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144743327447712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |