Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq2301 307 3e-81 seq2773 302 1e-79 seq811 286 9e-75 >seq2301 Length=88450 Score = 307 bits (340), Expect = 3e-81 Identities = 315/407 (77%), Gaps = 11/407 (3%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 4874 AGAAGAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTT 4815 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAA-GACAGGTGTGAAATC 128 |||||||| ||||||||||| | | |||||||| ||| | | | | ||||||| | Sbjct 4814 GTCCGGAATTATTGGGCGTAAAGAGCTTGTAGGCGGTT-TGTCACGTCTGCTGTGAAAAC 4756 Query 129 CCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGG 188 | ||||||||| | ||||| | | || | |||||||||||| || || | Sbjct 4755 TCGGGGCTTAACTCCGAGCTTGCAGTGGGTACGGGCAGACTAGAGTGTGGTAGGGGAGAC 4696 Query 189 TGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGG 248 ||||||||| ||||||| ||| |||||| |||||| ||||||||||| |||||||||| Sbjct 4695 TGGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGG 4636 Query 249 CAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAG 308 ||| | ||||| | ||||||||| | |||||||||||||||| ||||||||||| Sbjct 4635 CAGGTCTCTGGGCCATTACTGACGCTGAGAAGCGAAAGCGTGGGGAGCGAACAGGATTAG 4576 Query 309 ATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCC--- 365 |||||||||||||||||||| |||||| | |||| ||| |||| | | |||| Sbjct 4575 ATACCCTGGTAGTCCACGCCGTAAACGGTGGGCGCTAGGTGT--GGGACTCA-TTCCACG 4519 Query 366 ---TTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || ||||||||| | ||| ||||||||||| ||| Sbjct 4518 AGTTCCGTGCCGCAGCTAACGCATTAAGCGCCCCGCCTGGGGAGTAC 4472 >seq2773 Length=113092 Score = 302 bits (334), Expect = 1e-79 Identities = 317/414 (77%), Gaps = 11/414 (3%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 68551 TACCTGCAGAAGAAGCACCGGCCAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 68610 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAA-GACAGGTG 121 ||||||| |||||||||||||||||||| | || |||||||| ||| | | || Sbjct 68611 AAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTAGGCGGTT-TGTCGCGTCGTCTG 68669 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181 ||||| || ||| ||| | ||||| | || | |||| |||| | |||| Sbjct 68670 TGAAAACCAGCAGCTCAACTGTTGGCTTGCAGGCGATACGGGCAGACTTGAGTATTTCAG 68729 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 || | ||||||||| ||||||| |||||||||| |||||| ||||||||||| || Sbjct 68730 GGGAGACTGGAATTCCTGGTGTAGCGGTGAAATGCGCAGATATCAGGAGGAACACCGGTG 68789 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 |||||||| | | |||||| | ||||||||| | | |||||||||||| ||| |||| Sbjct 68790 GCGAAGGCGGGTCTCTGGGAAATAACTGACGCTGAGGAGCGAAAGCGTGGGTAGCGAACA 68849 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTAC 361 ||||||||||||||||||||||||||| |||||| | |||| ||| || ||| | Sbjct 68850 GGATTAGATACCCTGGTAGTCCACGCCGTAAACGGTGGGCGCTAGGTGT---GGGTTTCC 68906 Query 362 TTCC------TTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 |||| | || |||||||||||| | ||| ||||||||||| ||| Sbjct 68907 TTCCACGGGATCCGTGCCGTAGCTAACGCATTAAGCGCCCCGCCTGGGGAGTAC 68960 >seq811 Length=1020237 Score = 286 bits (316), Expect = 9e-75 Identities = 304/400 (76%), Gaps = 2/400 (1%) Strand=Plus/Plus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| ||| | |||||||| |||||||||||||||||||||||| || | || |||||| Sbjct 710628 AGAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTT 710687 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 | ||||||||| ||||||||||| | ||| |||| | | |||| | ||||||||| Sbjct 710688 ATTCGGAATTATTGGGCGTAAAGGGCGCGTAGGCTGATTAATAAGTTAAAAGTGAAATCC 710747 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | |||||||||| |||||||| ||| ||| |||||| || ||||| | Sbjct 710748 CGAGGCTTAACCTTGGAATTGCTTTTAAAACTATTAATCTAGAGATTGAAAGAGGATAGA 710807 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| ||||| || |||| |||| |||| |||||||||||| |||||||||| Sbjct 710808 GGAATTCCTGATGTAGAGGTAAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGGC 710867 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 || | || | || |||||| |||| | |||||||||||||||||||||||||||||| Sbjct 710868 GGCTCACTAGACGAATACTGACACTCAAGTACGAAAGCGTGGGGAGCAAACAGGATTAGA 710927 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTGG 369 |||||||||||||||||| |||||||| || | | || ||||||| || | Sbjct 710928 TACCCTGGTAGTCCACGCTGTAAACGATGAATGTTAAATATGGGAAGTTTACTTTCT--G 710985 Query 370 TAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || ||||||||||| || ||||||||||| ||| Sbjct 710986 TATTACAGCTAACGCGTTAAACATTCCGCCTGGGGACTAC 711025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1288808572480