Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq2773 89.7 5e-16 seq2301 89.7 5e-16 seq2167 75.2 1e-11 >seq2773 Length=113092 Score = 89.7 bits (98), Expect = 5e-16 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||| ||| || |||| |||||| | ||| ||| | ||||||| Sbjct 71793 CAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGATCGAGAGAACTATGGTTAAG 71852 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 ||||| |||||| || ||| |||||||||||| || ||| Sbjct 71853 GAACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 71891 >seq2301 Length=88450 Score = 89.7 bits (98), Expect = 5e-16 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| ||| || || ||| ||| || ||||||||||| | ||||||||| || |||| Sbjct 1620 CAAACCGACTCAGGTGGTCAGGTAGAGAATACTAAGGCGATCGAGTGAATCGTGGCTAAG 1561 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 ||| | |||||| || ||| |||||||||||| || ||| Sbjct 1560 GAATTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 1522 >seq2167 Length=120157 Score = 75.2 bits (82), Expect = 1e-11 Identities = 73/94 (78%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || ||||| ||||||||||| ||| | | | |||| Sbjct 65270 AAACCGACACAGGTGGACAGGTAGAGTATACCTAGGCGCTTGAGAGAACGATGCTGAAGG 65329 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| | |||||||||||||| || Sbjct 65330 AACTAGGCAAATTACATCTGTAACTTCGGGAGAA 65363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530884189980