Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq285 93.3 2e-17 seq336 89.7 2e-16 seq4279 86.0 3e-15 >seq285 Length=2505677 Score = 93.3 bits (102), Expect = 2e-17 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||||||| ||||||||||||||| | |||||||||| ||||| |||||||| Sbjct 1133992 GGAGAAGAAACTAACAAGGATTCCCTCAGTAGCTGCGAGTGAACCGGGAACAGCCCAGCA 1134051 Query 61 CCGAATCCC 69 ||||||||| Sbjct 1134052 CCGAATCCC 1134060 >seq336 Length=1077207 Score = 89.7 bits (98), Expect = 2e-16 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||| | ||||| |||| |||| |||||||| Sbjct 630317 GGAAAAGAAACTAACAAGGATTCCCTCAGTAGCTGCGAGCGAACCTGGAACAGCCCAGCA 630376 Query 61 CCGAATCCC 69 ||||||||| Sbjct 630377 CCGAATCCC 630385 >seq4279 Length=49714 Score = 86.0 bits (94), Expect = 3e-15 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||| | ||||| |||| ||||| |||||||| Sbjct 29755 GGAAAAGAAACTAACAAGGATTCCCTCAGTAGCTGCGAGCGAACCGGGAACAGCCCAGCA 29814 Query 61 CCGAA 65 ||||| Sbjct 29815 CCGAA 29819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230267440800