Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1104 223 6e-56 seq751 221 2e-55 seq423 206 4e-51 seq14536 170 3e-40 seq25486 136 6e-30 seq54891 134 2e-29 seq1204 122 1e-25 seq88 118 2e-24 seq21607 114 2e-23 seq1466 109 9e-22 seq261 109 9e-22 seq2790 104 4e-20 seq2040 104 4e-20 seq1 102 1e-19 seq3967 98.7 2e-18 seq1537 98.7 2e-18 seq2026 96.9 6e-18 seq51185 95.1 2e-17 seq9629 95.1 2e-17 seq1561 95.1 2e-17 seq2065 93.3 7e-17 seq2494 91.5 2e-16 seq4437 89.7 8e-16 seq5482 87.8 3e-15 seq2280 87.8 3e-15 seq55038 84.2 3e-14 seq537 84.2 3e-14 seq477 80.6 4e-13 seq862 78.8 1e-12 seq40 73.4 6e-11 >seq1104 Length=660783 Score = 223 bits (246), Expect = 6e-56 Identities = 197/241 (82%), Gaps = 14/241 (6%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 335643 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 335584 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA-------GCCACC 124 | ||| || | |||| |||||| |||||||||||||| ||| Sbjct 335583 C-TCAGTCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGAATTTAATTCGCCGGT 335526 Query 125 A--ACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 | || || || || | ||| |||||||| || |||||||||||||||||||||||| Sbjct 335525 AGCACTATTGT-GACGC--CTAGTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAAC 335469 Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 335468 CAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAA 335409 Query 243 G 243 | Sbjct 335408 G 335408 >seq751 Length=886750 Score = 221 bits (244), Expect = 2e-55 Identities = 209/263 (79%), Gaps = 18/263 (7%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||| || | |||||||||||||||| ||| ||||||| Sbjct 550442 TCCTTCAGTGTAGCGCGCGTGCGGCCGAGGATATCTAAGGGCATCACATACCAGTTATTG 550501 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC----AGCCACCA-- 125 | ||| || | |||| || || |||||||||||||| | |||| Sbjct 550502 C-TCAGTCT-CGTGCGGCTAGATGCTGCCTGTCCCTCTAAGAAGAATTTAATTCACCGGT 550559 Query 126 ---ACCATAGTCGAT---GGGG----CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGG 175 | || || ||| || | ||| |||||||| || ||||||||||||||||| Sbjct 550560 AGCATTATTGTGGATACCGGAGACGCCTAGTTAGCAGGCTAGAGTCTCGTTCGTTATCGG 550619 Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct 550620 AATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAAT 550679 Query 236 CAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| Sbjct 550680 CAAGAAAGAGCTATCAATCTGTC 550702 >seq423 Length=905886 Score = 206 bits (228), Expect = 4e-51 Identities = 207/263 (79%), Gaps = 23/263 (9%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||| ||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct 570034 TCCTTCAGTGTGGCGCGCGTGCGGCCCAGGACATCTA-GGGCATCACAGACCTTTTATTG 570092 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA-------GCCACC 124 | || || | |||| |||||| |||||||||||||| ||| Sbjct 570093 C-TCTGTCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGAATTTAATTCGCCGGT 570150 Query 125 A--ACCATAGTCGAT---GGGG----CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGG 175 | || || || ||| || | ||| |||||||| || |||||||||||| |||| Sbjct 570151 AGCACTATTGTGGATACCGGAGACGCCTAGTTAGCAGGCTAGAGTCTCGTTCGTTTTCGG 570210 Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 ||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||| Sbjct 570211 AATTAACCAGACAAATCGCTCCACCAACTATGAACGGCCATGCACCACCACC----GAAT 570266 Query 236 CAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| Sbjct 570267 CAAGAAAGAGCTATCAATCTGTC 570289 >seq14536 Length=10445 Score = 170 bits (188), Expect = 3e-40 Identities = 105/112 (94%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| || ||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 5658 TAGCAGGCTAGAGTCTCCTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAA 5717 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 5718 GAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 5769 >seq25486 Length=5719 Score = 136 bits (150), Expect = 6e-30 Identities = 95/108 (88%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||||| || ||||| |||||||||||||||||| ||||||||| |||||| | Sbjct 4762 CTAGTTAGCAGGCTAGAGTCTCTTTCGTTATCGGAATTAACGAGACAAATCGCTCCACAA 4821 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 | |||||||||||||||||| || |||| |||||||||||||||||| Sbjct 4822 AGTAAGAACGGCCATGCACCCCCTCCCACCGAATCAAGAAAGAGCTAT 4869 >seq54891 Length=2995 Score = 134 bits (148), Expect = 2e-29 Identities = 140/181 (77%), Gaps = 16/181 (9%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 150 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 209 Query 72 CCTCAAACTTCCATTG--GCTGGAAGCCAATAGTCCCTCTAAGAA--------GCCAGCC 121 |||| ||| || || |||||| || |||||||||| ||||| Sbjct 210 -CTCA---GTCCTGTGCACCTAGAAGCCGCCTGTTCCTCTAAGAATTTGATTCGCCAGTA 265 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 | || || || ||| | ||| |||||||| || ||||||||||||||||||||||| Sbjct 266 GC--ACTATTGTGGATACGCCTAGTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAA 323 Query 182 C 182 | Sbjct 324 C 324 >seq1204 Length=206426 Score = 122 bits (134), Expect = 1e-25 Identities = 138/182 (76%), Gaps = 15/182 (8%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 144419 TCCTTCAGTGTAGCGCGTGTGCGGCCCAGGCCATCTAAGGGCATCACAGACCTGTTATTG 144360 Query 72 CCTCAAACTT--CCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA-------GCCA 122 | ||| ||| || |||| |||||| |||||||||||||| ||| Sbjct 144359 C-TCAGTCTTGTCC---GGCTAGAAGCCGCCTGTCCCTCTAAGAAGAATTTGATTCGCCG 144304 Query 123 CCA--ACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | || || || |||| | ||| |||||||| || || | || |||||||||||||| Sbjct 144303 GTAGCACTATTGTGGATGCGCCTAGTTAGCAGGCTAGAGTTTTGTACGTTATCGGAATTA 144244 Query 181 AC 182 || Sbjct 144243 AC 144242 >seq88 Length=3042032 Score = 118 bits (130), Expect = 2e-24 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 29439 ACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAG 29498 Query 246 CTATCAATCTGTC 258 ||||||||||||| Sbjct 29499 CTATCAATCTGTC 29511 >seq21607 Length=8739 Score = 114 bits (126), Expect = 2e-23 Identities = 134/177 (76%), Gaps = 8/177 (5%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||| | ||| ||||| ||||||| |||||||||||||||||||||||||||||| Sbjct 8347 TCCTTCAGTATTGCGTGCGTGTGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 8406 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG-CCAGCCACC-----A 125 |||| ||| ||||| |||||| |||||||||||||| | |||| Sbjct 8407 -CTCAGTCTT-GTGTGGCTAGAAGCCGCCTGTCCCTCTAAGAAGTTGATTCACCGGTAGC 8464 Query 126 ACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 || || | ||| | ||| ||||||| | ||||||||||||| |||||||||| Sbjct 8465 ACTATTTTGGATACGCCTAGTTAGCAGACTTCAGTCTCGTTCGTTACCGGAATTAAC 8521 >seq1466 Length=384112 Score = 109 bits (120), Expect = 9e-22 Identities = 88/104 (85%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 282017 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAATGGCATCACAGACCTGTTATTG 281958 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 |||| | || |||| |||||| |||||||||||||| Sbjct 281957 -CTCAGTC-TCGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAG 281916 >seq261 Length=1587481 Score = 109 bits (120), Expect = 9e-22 Identities = 88/104 (85%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 37003 TCCTTCAGTGTAGCGCGCGTGCGGCGCAGGACATCTAAGGGCATCACAGACCTGTTATTG 37062 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 |||| | || |||| |||||| |||||||||||||| Sbjct 37063 -CTCAGTC-TCGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAG 37104 >seq2790 Length=78768 Score = 104 bits (114), Expect = 4e-20 Identities = 134/182 (74%), Gaps = 15/182 (8%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||| |||| || |||||||| ||||||||||||||||||||| Sbjct 61098 TCCTTCAGTGTAGCGCGCGTGGGGCCGAGGACATCTAAAGGCATCACAGACCTGTTATTG 61157 Query 72 CCTCAAACT--TCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG----CCAGCCACC- 124 |||| || ||| |||| |||||| |||||||||||||| | | || Sbjct 61158 -CTCAGTCTTGTCC---GGCTAGAAGCCGCCTGTCCCTCTAAGAAGAATTTGATTCGCCG 61213 Query 125 ----AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || | || ||| | ||| |||||||| || || | | |||||||||||||| Sbjct 61214 GTAGCACTGTTGTGGATACGCCTAGTTAGCAGGCTAGAGTTTTGAACGTTATCGGAATTA 61273 Query 181 AC 182 || Sbjct 61274 AC 61275 >seq2040 Length=379803 Score = 104 bits (114), Expect = 4e-20 Identities = 83/99 (84%), Gaps = 1/99 (1%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||||||||||||||| || | ||| | ||||||||||| | ||||| Sbjct 159995 GTCTCGTTCGTTATCGGAATTAACCAGAAAACTGCCTCTATCAACTAAGAAC-GTCATGC 160053 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 ||||||| ||| ||||||||| ||| ||||||| || Sbjct 160054 ACCACCAACCACCAAATCAAGAAGAAGCAATCAATCAGT 160092 >seq1 Length=10378279 Score = 102 bits (112), Expect = 1e-19 Identities = 86/103 (83%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 3300241 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 3300300 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA 114 |||| | || |||| |||||| |||||| || ||| Sbjct 3300301 -CTCAGTC-TCGTGCGGCTAGAAGCCGCCTGTCCCTTTAGGAA 3300341 >seq3967 Length=30590 Score = 98.7 bits (108), Expect = 2e-18 Identities = 130/177 (73%), Gaps = 15/177 (8%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||||||| || |||||||| ||||||||| ||||||||||| |||| Sbjct 4703 CAGTGTAGCGCGCGTGCGGCCGAGGACATCTAAAGGCATCACAAACCTGTTATTG-CTCA 4761 Query 77 AACT--TCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG----CCAGCCACC-----A 125 || ||| |||| |||||| |||||||||||||| | | || Sbjct 4762 GTCTTGTCC---GGCTAGAAGCCGCCTGTCCCTCTAAGAAGAATTTGATTCGCCGGTAGC 4818 Query 126 ACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 || | || ||| | ||| |||||||| || || | | |||||||||||||||| Sbjct 4819 ACTGTTGTGGATACGCCTAGTTAGCAGGCTAGAGTTTTGAACGTTATCGGAATTAAC 4875 >seq1537 Length=169322 Score = 98.7 bits (108), Expect = 2e-18 Identities = 87/106 (82%), Gaps = 6/106 (6%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||| || |||||||| |||||| || ||||||||||| Sbjct 12707 TCCTTCAGTGTAGCGCGCGTGCGGCCGAGGACATCTAAAGGCATCGCAAACCTGTTATTG 12648 Query 72 CCTCAAACT--TCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 |||| || ||| |||| |||||| |||||||||||||| Sbjct 12647 -CTCAGTCTTGTCC---GGCTAGAAGCCGCCTGTCCCTCTAAGAAG 12606 >seq2026 Length=118566 Score = 96.9 bits (106), Expect = 6e-18 Identities = 127/173 (73%), Gaps = 11/173 (6%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 |||||||||||||||| ||||||| ||||| |||| ||||||||||||||||| | ||| Sbjct 56682 CAGTGTAGCGCGCGTGAGGCCCAGGACATCGAAGGACATCACAGACCTGTTATCAC-TCA 56624 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC----CAGCCACCA-----AC 127 ||| || | |||||| ||| |||||||||| || || | || Sbjct 56623 GCCTTGTGAGGG-TAGAAGCCGCCTGTCTCTCTAAGAAGAATTTCATTCAACGGTAGCAC 56565 Query 128 CATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || || ||| | ||| |||| ||| || |||||||||||||||||||||| Sbjct 56564 TATTGTGGATACGCCTAGTTAGGAGGCTAGAGTCTCGTTCGTTATCGGAATTA 56512 >seq51185 Length=1112 Score = 95.1 bits (104), Expect = 2e-17 Identities = 83/100 (83%), Gaps = 5/100 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||| Sbjct 352 TCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTTTTG-CTC 294 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 | || | | || | |||| |||||||||||||| Sbjct 293 AGTCT--CGT--GCGGCTAGCCGCCTGTCCCTCTAAGAAG 258 >seq9629 Length=24877 Score = 95.1 bits (104), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 12/191 (6%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 ||| || || ||| ||||||||||||||||| ||||||| |||||||||| |||||||| Sbjct 202 TACACGCTGATTCCTTCAGTGTAGCGCGCGTGTGGCCCAGGACATCTAAGGACATCACAG 261 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG----C 116 ||| ||||||| |||| ||| ||||| |||| | || ||||||||||| Sbjct 262 ACCCGTTATTG-CTCAGTCTT-GTGTGGCT-GAAGTCGCCTGTACCTCTAAGAAGAATTT 318 Query 117 CAGCCACC-----AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTA 171 | | || || | || ||| | ||| |||||||| || || | | ||||| Sbjct 319 GATTCGCCGGTAGCACTGTTGTGGATACGCCTAGTTAGCAGGCTAGAGTTTTGAACGTTA 378 Query 172 TCGGAATTAAC 182 ||||||||||| Sbjct 379 TCGGAATTAAC 389 >seq1561 Length=228448 Score = 95.1 bits (104), Expect = 2e-17 Identities = 61/67 (91%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||| ||| ||||||||||||||||||||||| ||||||||||| |||| Sbjct 213343 AAATCGCTCCACCATCTATGAACGGCCATGCACCACCACCCACCGAATCAAGAAATAGCT 213402 Query 248 ATCAATC 254 ||||||| Sbjct 213403 ATCAATC 213409 Score = 95.1 bits (104), Expect = 2e-17 Identities = 61/67 (91%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||| ||| ||||||||||||||||||||||| ||||||||||| |||| Sbjct 213934 AAATCGCTCCACCATCTATGAACGGCCATGCACCACCACCCACCGAATCAAGAAATAGCT 213993 Query 248 ATCAATC 254 ||||||| Sbjct 213994 ATCAATC 214000 >seq2065 Length=101534 Score = 93.3 bits (102), Expect = 7e-17 Identities = 131/180 (73%), Gaps = 12/180 (7%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||| | ||||||||| ||||||| | |||||||| ||||||||||||||||||| Sbjct 62630 TCCTTCAGTATTGCGCGCGTGTGGCCCAGGATATCTAAGG-CATCACAGACCTGTTATTG 62688 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG----CCAGCCACC--- 124 |||| ||| |||| |||||| | ||||||||||| || |||| Sbjct 62689 -CTCAGTCTT-GTGCGGCTAGAAGCCGCCTATTCCTCTAAGAAGAATTTCATTCACCGGT 62746 Query 125 --AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 || || || ||| | | | ||||||| | ||||||||||||| |||||||||| Sbjct 62747 AGCACTATTGTGGATACGCCCAGTTAGCAGACTTCAGTCTCGTTCGTTACCGGAATTAAC 62806 >seq2494 Length=93536 Score = 91.5 bits (100), Expect = 2e-16 Identities = 84/104 (81%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||| ||||||||||||||||||||| | || ||||| ||||||||||||||||||| Sbjct 29628 TCCTTCAATGTAGCGCGCGTGCGGCCCAGGATATATAAGGACATCACAGACCTGTTATTG 29569 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 |||| ||| |||| ||||| |||||||||||||| Sbjct 29568 -CTCAGTCTT-GTGCGGCTAGAAGCTGCCTGTCCCTCTAAGAAG 29527 >seq4437 Length=75255 Score = 89.7 bits (98), Expect = 8e-16 Identities = 60/66 (91%), Gaps = 1/66 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 |||||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||| Sbjct 51049 TCCGTCAGTGTAGCGCGCGTGCAGCCGAGGTCATCTAAGGGCATCACAGACCGGTTATTG 50990 Query 72 CCTCAA 77 ||||| Sbjct 50989 -CTCAA 50985 Score = 75.2 bits (82), Expect = 2e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 198 ACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 || ||| |||||| |||||||| ||||||||| |||||| |||||| |||||||||||| Sbjct 49552 ACAAACGAAGAACAGCCATGCAACACCACCCACCGAATCACGAAAGACCTATCAATCTGT 49493 Query 258 C 258 | Sbjct 49492 C 49492 >seq5482 Length=30112 Score = 87.8 bits (96), Expect = 3e-15 Identities = 129/179 (72%), Gaps = 13/179 (7%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||| ||||||| ||||| |||| ||||||| |||||||| | Sbjct 29294 TCCTTCAGTGTAGCGCGCGTGAGGCCCAGGACATCGAAGGACATCACAAACCTGTTA-TC 29352 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------CCA-GCC 121 |||| ||| || | |||||| ||| |||||||||| | | | Sbjct 29353 ACTCAGTCTT-GTGCGGGTAGAAGCCGCCTGTCTCTCTAAGAAGAATTTGATTCGACGGT 29411 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | | || || || ||| | ||| ||| ||| || |||||||||||||||||||||| Sbjct 29412 AGC-ACTATTGTGGATATGCCTAGTTAAGAGGCTAGAGTCTCGTTCGTTATCGGAATTA 29469 >seq2280 Length=121987 Score = 87.8 bits (96), Expect = 3e-15 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 113734 TCCTTCAGTGTTGCGCGCGTGCGGCCCAGGGCATCTAAGGGCATCACAGATCTGTTATTG 113793 Query 72 C 72 | Sbjct 113794 C 113794 >seq55038 Length=2834 Score = 84.2 bits (92), Expect = 3e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 70 ||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||| Sbjct 890 TCCTTCAGTGTAGCGCGCGTGCAGCCGAGGTCATCTAAGGGCATCACAGACCTGTTATT 948 >seq537 Length=1897040 Score = 84.2 bits (92), Expect = 3e-14 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 220 |||||| |||||||||||||||||||||||| ||||| ||||||||||| || | ||| Sbjct 1550288 CTCGTTGATTATCGGAATTAACCAGACAAATCGCTCCATCAACTAAGAACAGCTACACAC 1550229 Query 221 CACCACCCA 229 || |||||| Sbjct 1550228 CATCACCCA 1550220 >seq477 Length=1213736 Score = 80.6 bits (88), Expect = 4e-13 Identities = 59/68 (87%), Gaps = 2/68 (3%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||||| || |||| | ||||||| ||||||||||||||||||| |||||||| Sbjct 733786 CTAGTTAGCAGGCTA--GTCTTGCTCGTTATTGGAATTAACCAGACAAATCGCTCCACCA 733843 Query 202 ACTAAGAA 209 ||||||| Sbjct 733844 TCTAAGAA 733851 >seq862 Length=739622 Score = 78.8 bits (86), Expect = 1e-12 Identities = 81/106 (76%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||||| || |||||| || |||||||| ||||| ||| ||||| | ||| | Sbjct 175141 CTAGTTAGCAGGCTAGAGTCTCGCTCATTATCGGATTTAACAAGAAAAATCTCAACACTA 175082 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 |||||||||| ||| || || |||| |||||| ||| |||| Sbjct 175081 ACTAAGAACGTTCATTCAACA----CCATCGAATCATAAAAAAGCT 175040 >seq40 Length=2649071 Score = 73.4 bits (80), Expect = 6e-11 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||||| || |||||| ||||||| ||| |||||||| |||||| |||||||| Sbjct 345349 CTAGTTAGCAGGCTAGAGTCTCGCTCGTTATTGGAGTTAACCAGTCAAATCGCTCCACCA 345408 Query 202 ACT 204 ||| Sbjct 345409 ACT 345411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796326284970