Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq2773 192 1e-46 seq2301 179 7e-43 seq811 149 1e-33 seq2167 145 1e-32 >seq2773 Length=113092 Score = 192 bits (212), Expect = 1e-46 Identities = 232/313 (74%), Gaps = 6/313 (2%) Strand=Plus/Plus Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCT-AAC 88 |||||||| | |||| || ||||| |||| || | | ||||||||| || ||| Sbjct 72334 ACGCCAGTGTGTGTGGAGTCGTTGTTGAAATACCACTCTGATCGTATTGGATACCTCAAC 72393 Query 89 C--GGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT 146 | |||| | | | | | | ||||||||| | | ||| ||||| ||||||||||| Sbjct 72394 CTCGGACCATG---ATCTGGTTCAGGGACAGTGCCTGGTGGGTAGTTTAACTGGGGCGGT 72450 Query 147 CGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGC 206 |||||||||| ||||||||||||||||||| | |||||||| ||| ||| || || | Sbjct 72451 TGCCTCCCAAAATGTAACGGAGGCGCCCAAAGGTTCCCTCAGCCTGGTTGGCAATCAGGT 72510 Query 207 GCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAA 266 | ||||||| ||| ||||| | ||||||| || || || ||| |||||||||||| Sbjct 72511 GTCGAGTGCAAGTGCACAAGGGAGCTTGACTGTGAGACTGACAGGTCGAGCAGGGACGAA 72570 Query 267 AGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGC 326 ||||||| || ||||||||| | ||||| | ||||||| ||||||||||| Sbjct 72571 AGTCGGGACTAGTGATCCGGCACCGGCATGTGGAAGCGGTGTCGCTCAACGGATAAAAGG 72630 Query 327 TACCCTGGGGATA 339 ||||| ||||||| Sbjct 72631 TACCCCGGGGATA 72643 >seq2301 Length=88450 Score = 179 bits (198), Expect = 7e-43 Identities = 168/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||| ||||||||||| |||||||||| ||||||||||||||||||| | |||| Sbjct 985 GGGTAGTTTAACTGGGGCGGTTGCCTCCCAAAATGTAACGGAGGCGCCCAAAGGTTCCCT 926 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 |||| ||| ||| || || | |||| || ||| ||||| | ||||||| || || Sbjct 925 CAGCCTGGTTGGCAATCAGGTTTCGAGTGTAAGTGCACAAGGGAGCTTGACTGTGAGACA 866 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 || ||| ||||| ||||||||||||| || ||| ||| ||||| ||||| || Sbjct 865 GACATGTCGAGCAGAGACGAAAGTCGGGACTAGTGACCCGACGGTGGCTTGTGGAAGCGC 806 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||||| ||||||||||| ||||| ||||||| Sbjct 805 CGTCGCTCAACGGATAAAAGGTACCCCGGGGATA 772 >seq811 Length=1020237 Score = 149 bits (164), Expect = 1e-33 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||| ||| | ||| |||||||||||||||||||||||| ||| ||||||||||||| Sbjct 848312 GGACATTGTATGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAAAGTAACGGAGGCG 848371 Query 172 CCCAAAGATACCCT-CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 | ||| || || ||| ||| ||||| || | ||| ||| |||| ||| || Sbjct 848372 TGCGAAGGTAAGCTAGAGC-TGGTCGGAAATCAGCTTGATAGTACAATGGCATAAGCTTG 848430 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 ||||||||| | |||| | ||||| |||||||||||| | || |||||||| | Sbjct 848431 CCTGACTGCGAGGCTGACAAGCCAAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTAAT 848490 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| |||||| || |||||| ||||||||||| ||| | ||||||| Sbjct 848491 TCTGTATGGAAGGGTTATCGCTCAACGGATAAAAGGTACGCCGGGGATA 848539 >seq2167 Length=120157 Score = 145 bits (160), Expect = 1e-32 Identities = 162/213 (76%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| |||||||||||||||||||||||||| |||||||||||||| | | | | || Sbjct 65977 GGGTAGTTTGACTGGGGCGGTCGCCTCCCA--GAGTAACGGAGGCGTGCGATGGTTAGCT 66034 Query 186 CAGCTTGGATGGAAACCATGCGC-ACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACAC 244 ||| |||| ||||| || | | ||||||| |||| ||| | ||||||||| | Sbjct 66035 CAGGTTGGTCGGAAATCAACTGTTAGAGTGCAATGGCATAAGCTAGCCTGACTGCGAGTC 66094 Query 245 CCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGG 304 |||| | ||||| |||||||||||| | || |||||||| ||| | || ||||| || Sbjct 66095 TGACAAGACGAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTGGTCCCGAGTGGAAGGG 66154 Query 305 CCGTCGCTCGACGGATAAAAGCTAC-CCTGGGG 336 | ||||| ||| ||||||| ||| ||||||| Sbjct 66155 TCATCGCTTAACGAATAAAAGGTACTCCTGGGG 66187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981797101120