Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq2773 131 2e-28 seq811 127 2e-27 seq2301 113 5e-23 >seq2773 Length=113092 Score = 131 bits (144), Expect = 2e-28 Identities = 117/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||||||||| |||| |||| ||||||| || || | ||||||| | | Sbjct 72260 CGGGGTCTTTTCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAATGCAATTTCGCCG 72201 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | ||||||||||| ||| |||||||||||||||||||||||||| Sbjct 72200 AGTCTATGGTTGAGACAGCTGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 72141 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||| |||| Sbjct 72140 GACAAGGAATTTCGCTACCTTAGGATGGTTA 72110 >seq811 Length=1020237 Score = 127 bits (140), Expect = 2e-27 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||| |||||| | |||||||| | |||||| ||| | | | ||||||| ||| Sbjct 848156 CGGGGTCTCTTCGTCTAACCGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTG 848097 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | | | | | ||||||| ||| |||||||||| ||||||||||||||| Sbjct 848096 AAATGATGTTGGAGACAGTGGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCC 848037 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 848036 GACAAGGAATTTCGCTACCTTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTC 847977 >seq2301 Length=88450 Score = 113 bits (124), Expect = 5e-23 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNN 102 ||| |||| ||||||| || || | ||||||| | ||| || ||| |||||||| Sbjct 1183 GCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCGAGTTCGCGGCTGAGACAGTG 1242 Query 103 NNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 162 ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1243 GAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 1302 Query 163 TAGGACCGTTA 173 ||||| |||| Sbjct 1303 TAGGATGGTTA 1313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546874677630