Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq2301 273 4e-71 seq2773 248 2e-63 seq811 179 7e-43 >seq2301 Length=88450 Score = 273 bits (302), Expect = 4e-71 Identities = 245/305 (80%), Gaps = 2/305 (1%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||||||||||||||| |||| ||||||||||||||| ||| ||||||||||||||||| Sbjct 4948 GGCGTCGCTGCATCAGGCTTTCGCCCATTGTGCAATATTCCCTACTGCTGCCTCCCGTAG 5007 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||| | Sbjct 5008 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCACCCTCTCAGGCCGGCTACCCGT 5067 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| || | || ||||||||| | || || ||||||||||||||| || Sbjct 5068 CGTCGCCTTGGTGAGCCACTACCTCACCAACAAGCTGATAGGCCGCGAGCCCATCCCCCA 5127 Query 181 GCGATAAATCTTTGGTCAAAGAATG-ATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 ||| ||| |||| | || | |||| | | || ||| | |||||||| Sbjct 5128 CCGAAAAAACTTTCCACCCGCAACGCATGCACGCACGAGTCA-TATCCAGTATTAGCTCC 5186 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 ||||||| ||||| ||| || | |||||||| |||||||||||||||||||| || Sbjct 5187 CGTTTCCCGGAGTTATCCCAGAGTGGAGGGCAGGTTACTCACGTGTTACTCACCCGTTCG 5246 Query 300 CCACT 304 ||||| Sbjct 5247 CCACT 5251 >seq2773 Length=113092 Score = 248 bits (274), Expect = 2e-63 Identities = 238/304 (78%), Gaps = 1/304 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||||||||||||||| || | ||||||||||||||| ||||||||||||||||||||| Sbjct 68486 GGCGTCGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 68427 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||||| || |||||||| ||||||||| | Sbjct 68426 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCGCCCTCTCAGGCCGGCTACCCGT 68367 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||| ||| |||| | ||||||| | || || ||||||| ||||||| | || Sbjct 68366 CGTCGCCTTGGTAGGCCATTACCCCACCAACAAGCTGATAGGCCGCGGGCCCATCCTGCA 68307 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 |||||||||||| | | |||| | | | | ||| ||||||||| Sbjct 68306 CCGATAAATCTTTCCACCACACGGCATGCACCGCGCAGTC-CTATCCGGTATTAGACCCA 68248 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||| |||| || || | ||||| | | |||||||||||||||||| ||| Sbjct 68247 GTTTCCCGGGCTTATCCCGAAGTGCAGGGCAGATCACCCACGTGTTACTCACCCGTTCGC 68188 Query 301 CACT 304 |||| Sbjct 68187 CACT 68184 >seq811 Length=1020237 Score = 179 bits (198), Expect = 7e-43 Identities = 245/339 (72%), Gaps = 21/339 (6%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| ||||| Sbjct 710555 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGAAGTCT 710496 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 || |||| ||||||| ||| |||||| | ||| |||||||| | |||| |||| | | Sbjct 710495 GGACCGTATCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGATCAGCTATAGATCATTGC 710436 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 |||||| |||||||| ||||||||| |||||| || ||||| ||| ||| Sbjct 710435 CTTGGTAGGCTATTACTCCACCAACTAGCTAATCTAATATAGGCTCATCTAATAGCAATA 710376 Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCC 246 ||| ||| || | | | | ||| ||||||||| ||||||| Sbjct 710375 AATTTTT---------------CCCCCGTAGGGC-GTATACGGTATTAGTTGCCGTTTCC 710332 Query 247 AAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTAA 306 || ||||||| || ||| || || || | ||||||||||||| |||||||| Sbjct 710331 AACAATTATTCCGTACTACTAGGTAGATTCCT-ATACATTACTCACCCGTCTGCCACTAA 710273 Query 307 GCTATA-TATCCAGCAAGCTTTCAACATAGCTCCGTTCG 344 | |||| ||| |||||||| | || ||| ||||||||| Sbjct 710272 GTTATACTAT--AGCAAGCTAT-AATATAACTCCGTTCG 710237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997787281920