Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq14536 80.6 3e-13 seq4329 80.6 3e-13 seq751 80.6 3e-13 seq73 75.2 1e-11 >seq14536 Length=10445 Score = 80.6 bits (88), Expect = 3e-13 Identities = 83/106 (78%), Gaps = 6/106 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | |||||| ||| Sbjct 6173 AAACCAACAAAATAGA-ACTAAAGTCCTATTCCATTATTCCATGCACACAGTATTCAGGC 6231 Query 69 GTAA----GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || ||||||||| | ||||||||||| |||| ||||| || Sbjct 6232 AGAAATCAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 6277 >seq4329 Length=81254 Score = 80.6 bits (88), Expect = 3e-13 Identities = 83/106 (78%), Gaps = 6/106 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | |||||| ||| Sbjct 40822 AAACCAACAAAATAGAACCGAA-GTCCTATTCCATTATTCCATGCACACAGTATTCAGGC 40880 Query 69 GTAA----GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || ||||||||| | ||||||||||| |||| ||||| || Sbjct 40881 AGAAATCAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 40926 >seq751 Length=886750 Score = 80.6 bits (88), Expect = 3e-13 Identities = 83/106 (78%), Gaps = 6/106 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | |||||| ||| Sbjct 551086 AAACCAACAAAATAGAACCGAA-GTCCTATTCCATTATTCCATGCACACAGTATTCAGGC 551144 Query 69 GTAA----GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || ||||||||| | ||||||||||| |||| ||||| || Sbjct 551145 AGAAATCAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 551190 >seq73 Length=3477260 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/106 (77%), Gaps = 6/106 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGC-TAATGTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | |||||| ||| Sbjct 478554 AAACCAACAAAATAGAACCGAA-GTCCTATTCCATTATTCCATGCACACAGTATTCAGGC 478612 Query 69 ----GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||||||| | |||||||||| |||| ||||| || Sbjct 478613 AGAAATCAGCCTGCTTTAAGCACTCTAATTGGTTCAAAGTAAACGT 478658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594846140580