Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq2773 131 1e-28 seq2301 125 6e-27 seq811 109 5e-22 >seq2773 Length=113092 Score = 131 bits (144), Expect = 1e-28 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||||| | ||||| ||| || |||| |||||| ||||| |||| || Sbjct 69390 TCGAGTTGCAGACCCCGATCCGAACTGAGACCGGCTTTAAGGGATTCGCTCCACCTCACG 69331 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||||||||| |||||||| | |||||||||||| |||||||| || Sbjct 69330 GTATCGCAGCCCTCTGTACCGGCCATTGTAGCATGTGTGAAGCCCTGGACATAAGGGGCA 69271 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 ||| ||||||||||| |||||||||||||||| Sbjct 69270 TGATGACTTGACGTCGTCCCCACCTTCCTCCG 69239 >seq2301 Length=88450 Score = 125 bits (138), Expect = 6e-27 Identities = 119/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||||| ||||||| ||| || ||| ||||||| ||||| ||| ||| Sbjct 4043 TCGAGTTGCAGACCCCAATCCGAACTGAGACCGGTTTTTTGGGATTCGCTCCACCTTGCG 4102 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||||||||| |||||||| | | ||||||||| | | |||||| || Sbjct 4103 GTATCGCAGCCCTCTGTACCGGCCATTGTAGCATGCGTGAAGCCCAAGACGTAAGGGGCA 4162 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 ||| || ||||||||||||||||||||||||| Sbjct 4163 TGATGATTTGACGTCATCCCCACCTTCCTCCG 4194 >seq811 Length=1020237 Score = 109 bits (120), Expect = 5e-22 Identities = 123/162 (76%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| ||||||||| ||| ||| |||| |||||||||| || ||| Sbjct 711457 TCGAGTTGCAGAGTACAATCCGAACTGAGAT-GTCTTTTAGGGATTAGCTTAGGCTTGCG 711399 Query 61 -GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 | || |||| |||| ||||||||| ||||||| ||||| ||||| |||| Sbjct 711398 CACCTTGCAGCCCATTGTAGACACCATTGTAGCACGTGTGTAGCCCACTTCATAAAGGCC 711339 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||| |||||||| ||||||||| |||||||| | || |||| Sbjct 711338 ATGATGACTTGACATCATCCCCATCTTCCTCCAGCTTATCAC 711297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415752678900