Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq2167 120 3e-25 seq811 120 3e-25 >seq2167 Length=120157 Score = 120 bits (132), Expect = 3e-25 Identities = 123/160 (77%), Gaps = 7/160 (4%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||| ||||||| |||||||| || | |||||||||||||||||||| |||||| ||| Sbjct 66166 GTTAAGCGATGACCCTTCCACTCGGGACCACCGGATCACTATGACCGACTTTCGTCTCTG 66107 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCAC----GA 139 |||| |||| |||||||||| || |||||||||||||||||| || || || Sbjct 66106 CTCGTCTTGTCAGACTCGCAGTCAGGCTAGCTTATGCCATTGCACT---CTAACAGTTGA 66050 Query 140 TGTCCGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||||||| | |||| ||| ||| | ||||||||| Sbjct 66049 TTTCCGACCAACCTGAGCTAACCATCGCACGCCTCCGTTA 66010 >seq811 Length=1020237 Score = 120 bits (132), Expect = 3e-25 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||| ||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct 848516 GTTGAGCGATAACCCTTCCATACAGAATTACCGGATCACTATGACCGACTTTCGTCTCTG 848457 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 || | |||| |||||||||| || |||||||||||||| |||| | ||| || Sbjct 848456 CTTGGCTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTGTACTATCAAGCTGATTTC 848397 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||| ||||| ||||||| | ||||||||| Sbjct 848396 CGACCAGCTCTAGCTTACCTTCGCACGCCTCCGTTA 848361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473318434440