Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq8901 104 5e-20 >seq8901 Length=24856 Score = 104 bits (114), Expect = 5e-20 Identities = 112/147 (76%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 173 CCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCCCAG 232 |||||||||||||| || |||||||| || |||||||| ||| || || |||| Sbjct 22840 CCGTCCTCGCCCCATCGATAGGCGCGCGATCGAGCATGGTCGAAGGGAAACGAGTTCCAG 22781 Query 233 GCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGGTAG 292 |||||||| || ||| |||||| ||||| || || ||||| ||||| | |||||| Sbjct 22780 GCGTCGCCGTCCGCGGAGTAGTCCTCGCGGACGGTTCCCCACTGGCGACCCGCCAGGTAC 22721 Query 293 GGGCCCCACTCGCGCCAGCGCTCGGCG 319 ||||||||| |||||| ||| | ||| Sbjct 22720 GGGCCCCACGTGCGCCA-CGCACCGCG 22695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007381390400