Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_016654.1 Length=39474 Score E Sequences producing significant alignments: (Bits) Value seq49429 280 4e-71 >seq49429 Length=1101 Score = 280 bits (310), Expect = 4e-71 Identities = 259/328 (79%), Gaps = 0/328 (0%) Strand=Plus/Plus Query 12215 CCGAGTTGCGGTTCACGCCGGCCGGTGCTGCCGTCGCCAACTTCACCGTCGCGTCCACGC 12274 |||| | || ||||| || |||||||| || ||||| |||||||||||||||||||| | Sbjct 1 CCGAACTTCGATTCACCCCCGCCGGTGCGGCGGTCGCGAACTTCACCGTCGCGTCCACTC 60 Query 12275 CGCGCACGTTCGACAAGCAGGCGAACGAGTGGAAGGACGGGGAGGCGCTGTTCATGCGCT 12334 | ||||| ||||| ||| | ||||||||||||||||| || ||||||||| | |||| Sbjct 61 CCCGCACCTTCGATCGCCAGACCAACGAGTGGAAGGACGGCGACGCGCTGTTCCTCCGCT 120 Query 12335 GCCAGGTGTGGCGTGAGGCCGCCGAGAACGTCGCCGAGAGCTTGTCGCGGGGCTCGCGGG 12394 || | | ||||||||||| || ||||||||||||||| | || | || ||| | |||| Sbjct 121 GCAACATCTGGCGTGAGGCAGCGGAGAACGTCGCCGAGTCCCTGACTCGCGGCGCACGGG 180 Query 12395 TCATCGTCACCGGCAAGCTCAAGTCCCGCACCTTCGAGACGCGTGAGGGGGAGAAGCGGA 12454 | ||||||| ||| |||| | || ||||||||||||||||||| |||||||| | Sbjct 181 TGGTCGTCACGGGCCGGCTCCGGCAGCGTTCCTTCGAGACGCGTGAGGGTGAGAAGCGCA 240 Query 12455 CCGTCATCGAACTGGAGGTCGACGAGATCGGCCCCAGCCTCCGCTACGCCACCGCCACCG 12514 | ||| ||||||| |||||||||||| ||||||| ||||||||||| || |||| | Sbjct 241 CTGTCGTCGAACTCGAGGTCGACGAGGTCGGCCCTTCGCTCCGCTACGCGACGGCCAAGG 300 Query 12515 TGAACAAGGCCAACCGCGGCGGGGGAGG 12542 | ||||||| || ||||| || || || Sbjct 301 TCAACAAGGTCAGTCGCGGTGGCGGCGG 328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126103232881840