Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_031076.1 Length=38071 Score E Sequences producing significant alignments: (Bits) Value seq49429 140 8e-29 >seq49429 Length=1101 Score = 140 bits (154), Expect = 8e-29 Identities = 180/246 (73%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 34928 GCCGTCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCGGCAAGCCAACGAA 34987 || ||||| |||||||||||||| ||||| || ||||| ||||| || || ||||||| Sbjct 30 GCGGTCGCGAACTTCACCGTCGCGTCCACTCCCCGCACCTTCGATCGCCAGACCAACGAG 89 Query 34988 TGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGTCAGCCGGCCGAGAAC 35047 |||||||||||||| || |||||||| | |||| | |||||| || | || |||||| Sbjct 90 TGGAAGGACGGCGACGCGCTGTTCCTCCGCTGCAACATCTGGCGTGAGGCAGCGGAGAAC 149 Query 35048 GTGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCGTCCAGGGACGTCTCCGGGCGCGC 35107 || ||||| || ||| | ||| || ||| ||||| ||| || |||||| ||| Sbjct 150 GTCGCCGAGTCCCTGACTCGCGGCGCACGGGTGGTCGTCACGGGCCGGCTCCGGCAGCGT 209 Query 35108 AGCTACGACGAC-CGCGACGGAAACCGTCGCACTGTGATCGGGATCGAAGTCGATGACGT 35166 || ||| ||| || || || | |||||||| ||| |||| ||||| || || Sbjct 210 TCCTTCGA-GACGCGTGAGGGTGAGAAGCGCACTGTCGTCGAACTCGAGGTCGACGAGGT 268 Query 35167 GGGCCC 35172 ||||| Sbjct 269 CGGCCC 274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121616904762020